Evidence map›Paper›PMID 25114023›Full record

ArticleThe Journal of general physiology2014

Ion conduction and selectivity in acid-sensing ion channel 1.

Lei Yang, Lawrence G Palmer

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Proline substitutions in the ASIC1 β11-12 linker slow desensitization.bioRxiv : the preprint server for biology · 2024
    Article
  3. Structural basis for excitatory neuropeptide signaling.Nature structural & molecular biology · 2024
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Changes in HFrontiers in cellular neuroscience · 2021
    Article
  11. Article
  12. Article
  13. A NaThe Journal of biological chemistry · 2019
    Article
  14. Article
  15. Article
  16. Article
  17. Determinants of selective ion permeation in the epithelial NaThe Journal of general physiology · 2018
    Article
  18. Acid-sensing ion channels emerged over 600 Mya and are conserved throughout the deuterostomes.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 2 countries.

Lei YangDepartment of Physiology and Biophysics, Weill Cornell Medical College, New York, NY 10065 Department of Physiology, Harbin Medical University, Harbin 150081, China.
Lawrence G PalmerDepartment of Physiology and Biophysics, Weill Cornell Medical College, New York, NY 10065 lgpalm@med.cornell.edu.
Cornell University · US

Funding

MEMBRANE PROCESSES MEDIATING NACL TRANSPORTR01DK027847 · NIDDK · WEILL MEDICAL COLL OF CORNELL UNIV · PI PALMER, LAWRENCE G · 1986 to 2013
$4.8M
NIDDK NIH HHS DK27847NIDDK NIH HHS R01 DK027847
6 · The paper itself

Abstract

The ability of acid-sensing ion channels (ASICs) to discriminate among cations was assessed based on changes in conductance and reversal potential with ion substitution. Human ASIC1a was expressed in Xenopus laevis oocytes, and acid-induced currents were measured using two-electrode voltage clamp. Replacement of extracellular Na(+) with Li(+), K(+), Rb(+), or Cs(+) altered inward conductance and shifted the reversal potentials consistent with a selectivity sequence of Li ∼ Na > K > Rb > Cs. Permeability decreased more rapidly than conductance as a function of atomic size, with P(K)/P(Na) = 0.1 and G(K)/G(Na) = 0.7 and P(Rb)/P(Na) = 0.03 and G(Rb)/G(Na) = 0.3. Stimulation of Cl(-) currents when Na(+) was replaced with Ca(2+), Sr(2+), or Ba(2+) indicated a finite permeability to divalent cations. Inward conductance increased with extracellular Na(+) in a hyperbolic manner, consistent with an apparent affinity (K(m)) for Na(+) conduction of 25 mM. Nitrogen-containing cations, including NH4(+), NH3OH(+), and guanidinium, were also permeant. In addition to passing through the channels, guanidinium blocked Na(+) currents, implying competition for a site within the pore. The role of negative charges in an external vestibule of the pore was evaluated using the point mutation D434N. The mutant channel had a decreased single-channel conductance, measured in excised outside-out patches, and a macroscopic slope conductance that increased with hyperpolarization. It had a weakened interaction with Na(+) (K(m) = 72 mM) and a selectivity that was shifted toward larger atomic sizes. We conclude that the selectivity of ASIC1 is based at least in part on interactions with binding sites both within and internal to the outer vestibule.

Indexed as

Acid Sensing Ion ChannelsAmino Acid SequenceAmmonium CompoundsAnimalsBinding SitesCations, DivalentCations, MonovalentGuanidineHumansIon TransportMolecular Sequence DataMutationSodium Channel BlockersXenopusAcid Sensing Ion ChannelsAmmonium CompoundsASIC1 protein, humanCations, DivalentCations, MonovalentGuanidineSodium Channel Blockers

Identifiers

PMID25114023
PMCPMC4144671
OpenAlexW2051746917

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.