Evidence map›Paper›PMID 25113618›Full record

ArticleJournal of assisted reproduction and genetics2014

The gene expression profile of cumulus cells reveals altered pathways in patients with endometriosis.

Adolfo Allegra, Stefania Raimondo, Aldo Volpes, Daniele Fanale, Angelo Marino, Giuseppe Cicero, Giacomo De Leo, Francesca Sammartano, Giulia Allegra, Riccardo Alessandro

Open access · bronzeAbstract read
In one paragraph

Article in Journal of assisted reproduction and genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Adolfo AllegraAndros Day Surgery Clinic, Reproductive Medicine Unit, Via Ausonia 43/45, 90144, Palermo, Italy, allegra@centroandros.it.
Stefania Raimondo
Aldo Volpes
Daniele Fanale
Angelo Marino
Giuseppe Cicero
Giacomo De Leo
Francesca Sammartano
Giulia Allegra
Riccardo Alessandro
University of Palermo · ITSeattle Reproductive Medicine · USAndros Clinica Day Surgery · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeThe objective of this experimental study was to compare the global gene expression profile of CC of mature oocytes in 18 patients with severe endometriosis and CC in 18 control patients affected by a severe male factor.

methodsFor each group, the CC were pooled, RNA was extracted and a microarray performed. For validating the microarray, a quantitative real-time PCR was performed in the CC of an independent set of patients with endometriosis (n = 5) and controls (n = 7).

results595 differentially expressed genes (320 down-regulated, 275 up-regulated, p < 0.05, fold change ≥1.5) were identified. The most significant changes were observed in genes involved in the chemokine signaling and cell-cell or cell-extracellular matrix adhesion pathways. Several genes of these pathways were down-regulated in endometriosis. Individual RT-PCR assays confirmed the microarray for ten genes.

conclusionsSeveral genes involved in the chemokine mediated-signaling pathway and in the functional cross-talk between CC and the oocyte are down-regulated in endometriosis CC. The impairment of these processes could explain the reduction of oocyte competence in endometriosis. This preliminary knowledge could be the starting point for a more detailed elucidation of the relationship between endometriosis and oocyte competence.

Indexed as

AdolescentAdultCase-Control StudiesCumulus CellsDown-RegulationEndometriosisFemaleGene Expression ProfilingHumansMaleMicroarray AnalysisOocytesSignal TransductionTranscriptomeUp-RegulationYoung Adult

Identifiers

PMID25113618
PMCPMC4171411
OpenAlexW1984437801

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.