Evidence map›Paper›PMID 25111632›Full record

ArticleChembiochem : a European journal of chemical biology2014

Chemical interrogation of the malaria kinome.

Emily R Derbyshire, Vanessa Zuzarte-Luís, Andreia D Magalhães, Nobutaka Kato, Paul C Sanschagrin, Jinhua Wang, Wenjun Zhou, Chandrasekhar V Miduturu, Ralph Mazitschek, Piotr Sliz and 3 more

Abstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 39 citations in OpenAlex.

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  15. Kinase inhibitors: the road ahead.Nature reviews. Drug discovery · 2018
    Review
  16. Identification of Hsp90 Inhibitors with Anti-Plasmodium Activity.Antimicrobial agents and chemotherapy · 2018
    Article
  17. Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Emily R DerbyshireDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115 (USA). emily.derbyshire@duke.edu.
Vanessa Zuzarte-Luís
Andreia D Magalhães
Nobutaka Kato
Paul C Sanschagrin
Jinhua Wang
Wenjun Zhou
Chandrasekhar V Miduturu
Ralph Mazitschek
Piotr Sliz
Maria M Mota
Nathanael S Gray
Jon Clardy
Harvard University · USUniversity of Lisbon · PTBroad Institute · USMassachusetts General Hospital · US

Funding

Structural and Mechanistic Studies of Regulation of let-7 biogenesis by Lin28'R01CA163647 · NCI · HARVARD MEDICAL SCHOOL · PI SLIZ, PIOTR · 2012 to 2016
$1.7M
Discovering new compounds to treat global infectious diseaseR00GM099796 · NIGMS · DUKE UNIVERSITY · PI DERBYSHIRE, EMILY R · 2014 to 2016
$747k
Discovering new compounds to treat global infectious diseaseK99GM099796 · NIGMS · HARVARD MEDICAL SCHOOL · PI DERBYSHIRE, EMILY R · 2013 to 2014
$120k
NCI NIH HHS R01 CA163647NIGMS NIH HHS GM099796NIGMS NIH HHS K99 GM099796NIGMS NIH HHS R00 GM099796
6 · The paper itself

Abstract

Malaria, an infectious disease caused by eukaryotic parasites of the genus Plasmodium, afflicts hundreds of millions of people every year. Both the parasite and its host utilize protein kinases to regulate essential cellular processes. Bioinformatic analyses of parasite genomes predict at least 65 protein kinases, but their biological functions and therapeutic potential are largely unknown. We profiled 1358 small-molecule kinase inhibitors to evaluate the role of both the human and the malaria kinomes in Plasmodium infection of liver cells, the parasites' obligatory but transient developmental stage that precedes the symptomatic blood stage. The screen identified several small molecules that inhibit parasite load in liver cells, some with nanomolar efficacy, and each compound was subsequently assessed for activity against blood-stage malaria. Most of the screening hits inhibited both liver- and blood-stage malaria parasites, which have dissimilar gene expression profiles and infect different host cells. Evaluation of existing kinase activity profiling data for the library members suggests that several kinases are essential to malaria parasites, including cyclin-dependent kinases (CDKs), glycogen synthase kinases, and phosphoinositide-3-kinases. CDK inhibitors were found to bind to Plasmodium protein kinase 5, but it is likely that these compounds target multiple parasite kinases. The dual-stage inhibition of the identified kinase inhibitors makes them useful chemical probes and promising starting points for antimalarial development.

Indexed as

AnimalsAntimalarialsComputational BiologyDrug Evaluation, PreclinicalGenome, ProtozoanHumansLiverMalariaMaleMiceMice, Inbred C57BLPlasmodiumProtein Kinase InhibitorsProtein KinasesSmall Molecule LibrariesAntimalarialsProtein Kinase InhibitorsProtein KinasesSmall Molecule Librariesbioinformaticschemical probeshigh-throughput screeningkinasesmalariaPlasmodium

Identifiers

PMID25111632
PMCPMC4237307
OpenAlexW2002218888

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.