Evidence map›Paper›PMID 25106867›Full record

ArticleNucleic acids research2014

Drosophila COP9 signalosome subunit 7 interacts with multiple genomic loci to regulate development.

Ruth Singer, Shimshi Atar, Osnat Atias, Efrat Oron, Daniel Segal, Joel A Hirsch, Tamir Tuller, Amir Orian, Daniel A Chamovitz

Abstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. The COP9 signalosome and cullin-RING ligases in the heart.American journal of cardiovascular disease · 2015
    Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ruth SingerDepartment of Molecular Biology and Ecology of Plants.
Shimshi AtarDepartment of Biomedical Engineering.
Osnat AtiasDepartment of Molecular Biology and Ecology of Plants.
Efrat OronDepartment of Molecular Biology and Ecology of Plants.
Daniel SegalDepartment of Molecular Microbiology and Biotechnology.
Joel A HirschDepartment of Biochemistry and Molecular Biology, Tel Aviv University, Ramat Aviv, Tel Aviv 69978, Israel.
Tamir TullerDepartment of Biomedical Engineering.
Amir OrianCancer and Vascular Biology Research Center, Faculty of Medicine, Technion-Israel Institute of Technology, Haifa, Israel.
Daniel A ChamovitzDepartment of Molecular Biology and Ecology of Plants dannyc@tauex.tau.ac.il.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The COP9 signalosome protein complex has a central role in the regulation of development of multicellular organisms. While the function of this complex in ubiquitin-mediated protein degradation is well established, results over the past few years have hinted that the COP9 signalosome may function more broadly in the regulation of gene expression. Here, using DamID technology, we show that COP9 signalosome subunit 7 functionally associates with a large number of genomic loci in the Drosophila genome, and show that the expression of many genes within these loci is COP9 signalosome-dependent. This association is likely direct as we show CSN7 binds DNA in vitro. The genes targeted by CSN7 are preferentially enriched for transcriptionally active regions of the genome, and are involved in the regulation of distinct gene ontology groupings including imaginal disc development and cell-cycle control. In accord, loss of CSN7 function leads to cell-cycle delay and altered wing development. These results indicate that CSN7, and by extension the entire COP9 signalosome, functions directly in transcriptional control. While the COP9 signalosome protein complex has long been known to regulate protein degradation, here we expand the role of this complex by showing that subunit 7 binds DNA in vitro and functions directly in vivo in transcriptional control of developmentally important pathways that are relevant for human health.

Indexed as

Gene Expression Regulation, DevelopmentalAdaptor Proteins, Signal TransducingAnimalsBinding SitesCell LineCOP9 Signalosome ComplexDNADNA-Binding ProteinsDrosophilaDrosophila ProteinsG1 Phase Cell Cycle CheckpointsGenetic LociGenome, InsectTranscription, GeneticWings, AnimalAdaptor Proteins, Signal TransducingCOP9 Signalosome ComplexCSN7 protein, DrosophilaDNADNA-Binding ProteinsDrosophila Proteins

Identifiers

PMID25106867
PMCPMC4150811

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.