Evidence map›Paper›PMID 25105669›Full record

ArticlePloS one2014

Novel methods of automated quantification of gap junction distribution and interstitial collagen quantity from animal and human atrial tissue sections.

Jiajie Yan, Justin K Thomson, Xiaomin Wu, Weiwei Zhao, Andrew E Pollard, Xun Ai

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Alterations of housekeeping proteins in human aged and diseased hearts.Pflugers Archiv : European journal of physiology · 2021
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Quantifying Intermembrane Distances with Serial Image Dilations.Journal of visualized experiments : JoVE · 2018
    Article
  15. Quantification of airway fibrosis in asthma by flow cytometry.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2018
    Article
  16. Article
  17. Article
  18. Article
  19. Atrial fibrillation.Nature reviews. Disease primers · 2016
    Article
  20. The Stress-Response MAP Kinase Signaling in Cardiac Arrhythmias.Reviews of physiology, biochemistry and pharmacology · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jiajie YanDepartment of Cell and Molecular Physiology, Loyola University Chicago, Maywood, Illinois, United States of America.
Justin K ThomsonDepartment of Cell and Molecular Physiology, Loyola University Chicago, Maywood, Illinois, United States of America.
Xiaomin WuDepartment of Cell and Molecular Physiology, Loyola University Chicago, Maywood, Illinois, United States of America.
Weiwei ZhaoDepartment of Cell and Molecular Physiology, Loyola University Chicago, Maywood, Illinois, United States of America.
Andrew E PollardDepartment of Biomedical Engineering, University of Alabama at Birmingham, Birmingham, Alabama, United States of America.
Xun AiDepartment of Cell and Molecular Physiology, Loyola University Chicago, Maywood, Illinois, United States of America.

Funding

JNK Suppression of Connexin43 Enhances Atrial Fibrillation in Aged AtriaR01HL113640 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI AI, XUN · 2012 to 2015
$1.5M
Novel Methods for Cardiac Micro-Impedance MeasurementR01HL092049 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI POLLARD, ANDREW EMIL · 2009 to 2014
$1.5M
NHLBI NIH HHS HL092049NHLBI NIH HHS HL113640NHLBI NIH HHS R01 HL092049NHLBI NIH HHS R01 HL113640
6 · The paper itself

Abstract

backgroundGap junctions (GJs) are the principal membrane structures that conduct electrical impulses between cardiac myocytes while interstitial collagen (IC) can physically separate adjacent myocytes and limit cell-cell communication. Emerging evidence suggests that both GJ and interstitial structural remodeling are linked to cardiac arrhythmia development. However, automated quantitative identification of GJ distribution and IC deposition from microscopic histological images has proven to be challenging. Such quantification is required to improve the understanding of functional consequences of GJ and structural remodeling in cardiac electrophysiology studies. METHODS AND

resultsSeparate approaches were employed for GJ and IC identification in images from histologically stained tissue sections obtained from rabbit and human atria. For GJ identification, we recognized N-Cadherin (N-Cad) as part of the gap junction connexin 43 (Cx43) molecular complex. Because N-Cad anchors Cx43 on intercalated discs (ID) to form functional GJ channels on cell membranes, we computationally dilated N-Cad pixels to create N-Cad units that covered all ID-associated Cx43 pixels on Cx43/N-Cad double immunostained confocal images. This approach allowed segmentation between ID-associated and non-ID-associated Cx43. Additionally, use of N-Cad as a unique internal reference with Z-stack layer-by-layer confocal images potentially limits sample processing related artifacts in Cx43 quantification. For IC quantification, color map thresholding of Masson's Trichrome blue stained sections allowed straightforward and automated segmentation of collagen from non-collagen pixels. Our results strongly demonstrate that the two novel image-processing approaches can minimize potential overestimation or underestimation of gap junction and structural remodeling in healthy and pathological hearts. The results of using the two novel methods will significantly improve our understanding of the molecular and structural remodeling associated functional changes in cardiac arrhythmia development in aged and diseased hearts.

Indexed as

AdultAgedAged, 80 and overAgingAnimalsCadherinsCollagenConnexin 43Extracellular FluidFemaleGap JunctionsHeart AtriaHumansImage Processing, Computer-AssistedImmunohistochemistryMaleCadherinsCollagenConnexin 43

Identifiers

PMID25105669
PMCPMC4126721

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.