Evidence map›Paper›PMID 25105126›Full record

ArticleBioMed research international2014

Prophages in enterococcal isolates from renal transplant recipients: renal failure etiologies promote selection of strains.

Agnieszka Daca, Tomasz Jarzembowski, Jacek M Witkowski, Ewa Bryl, Bolesław Rutkowski, Alicja Dębska-Ślizień

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. From the Friend to the Foe-International journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Agnieszka DacaDepartment of Pathology and Experimental Rheumatology, Medical University of Gdańsk, Dębinki 7 Street, 80-211 Gdańsk, Poland.
Tomasz JarzembowskiDepartment of Microbiology, Medical University of Gdańsk, Do Studzienki 38 Street, 80-227 Gdańsk, Poland.ORCID 0000-0002-1622-1807
Jacek M WitkowskiDepartment of Pathophysiology, Medical University of Gdańsk, Dębinki 7 Street, 80-211 Gdańsk, Poland.
Ewa BrylDepartment of Pathology and Experimental Rheumatology, Medical University of Gdańsk, Dębinki 7 Street, 80-211 Gdańsk, Poland.
Bolesław RutkowskiDepartment of Nephrology, Transplantology and Internal Medicine, Medical University of Gdańsk, Dębinki 7 Street, 80-952 Gdańsk, Poland.
Alicja Dębska-ŚlizieńDepartment of Nephrology, Transplantology and Internal Medicine, Medical University of Gdańsk, Dębinki 7 Street, 80-952 Gdańsk, Poland.
Gdańsk Medical University · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Infections caused by commensal bacteria may be fatal for the patients under immunosuppressive therapy. This results also from difficulty in identification of high risk strains. Enterococcal infections are increasingly frequent but despite many studies on virulence traits, the difference between commensal and pathogenic strains remains unclear. Prophages are newly described as important elements in competition between strains during colonization, as well as pathogenicity of the strains. Here we evaluate a difference in presence of pp4, pp1, and pp7 prophages and ASA (aggregation substance) gene expression in enterococcal isolates from renal transplant recipients (RTx) with different etiology of the end-stage renal failure. Prophages sequence was screened by PCR in strains of Enterococcus faecalis isolated from urine and feces of 19 RTx hospitalized at Medical University of Gdansk and 18 healthy volunteers. FLOW-FISH method with use of linear locked nucleic acid (LNA) probe was used to assess the ASA gene expression. Additionally, ability of biofilm formation was screened by crystal violet staining method. Presence of prophages was more frequent in fecal isolates from immunocompromised patients than in isolates from healthy volunteers. Additionally, both composition of prophages and ASA gene expression were related to the etiology of renal disease.

Indexed as

Enterococcus faecalisGram-Positive Bacterial InfectionsKidney TransplantationProphagesTransplant RecipientsBacterial ProteinsFemaleGene Expression Regulation, BacterialHumansKidney Failure, ChronicMaleaggregation substance, Enterococcus faecalisBacterial Proteins

Identifiers

PMID25105126
PMCPMC4106134
OpenAlexW2032481797

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.