Evidence map›Paper›PMID 25104972›Full record

ArticleJournal of biological engineering2014

"NiCo Buster": engineering E. coli for fast and efficient capture of cobalt and nickel.

Alexandre Duprey, Viviane Chansavang, Franck Frémion, Clémence Gonthier, Yoann Louis, Philippe Lejeune, Fanny Springer, Valérie Desjardin, Agnès Rodrigue, Corinne Dorel

Open access · goldAbstract read
In one paragraph

Article in Journal of biological engineering, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 56 citations in OpenAlex.

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  6. Using a Riboswitch Sensor to Detect CoFrontiers in chemistry · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Alexandre DupreyiGEM team INSA Lyon, Plateforme de Biologie de Synthèse, Département Biosciences, INSA Lyon, 69621 Villeurbanne Cedex, France.
Viviane ChansavangiGEM team INSA Lyon, Plateforme de Biologie de Synthèse, Département Biosciences, INSA Lyon, 69621 Villeurbanne Cedex, France.
Franck FrémioniGEM team INSA Lyon, Plateforme de Biologie de Synthèse, Département Biosciences, INSA Lyon, 69621 Villeurbanne Cedex, France.
Clémence GonthieriGEM team INSA Lyon, Plateforme de Biologie de Synthèse, Département Biosciences, INSA Lyon, 69621 Villeurbanne Cedex, France.
Yoann LouisUniversité de Lyon, INSA-Lyon, LGCIE, Villeurbanne F-69621, France.
Philippe LejeuneUniversité de Lyon, INSA-Lyon, Université Claude Bernard Lyon I, CNRS, MAP, UMR5240, Villeurbanne F-69621, France.
Fanny SpringerUniversité de Lyon, INSA-Lyon, LGCIE, Villeurbanne F-69621, France.
Valérie DesjardinUniversité de Lyon, INSA-Lyon, LGCIE, Villeurbanne F-69621, France.
Agnès Rodrigue *Université de Lyon, INSA-Lyon, Université Claude Bernard Lyon I, CNRS, MAP, UMR5240, Villeurbanne F-69621, France.
Corinne Dorel *Université de Lyon, INSA-Lyon, LGCIE, Villeurbanne F-69621, France.
Université Claude Bernard Lyon 1 · FRInstitut National des Sciences Appliquées de Lyon · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMetal contamination is widespread and results from natural geogenic and constantly increasing anthropogenic sources (mainly mining and extraction activities, electroplating, battery and steel manufacturing or metal finishing). Consequently, there is a growing need for methods to detoxify polluted ecosystems. Industrial wastewater, surface water and ground water need to be decontaminated to alleviate the contamination of soils and sediments and, ultimately, the human food chain. In nuclear power plants, radioactive metals are produced; these metals need to be removed from effluents before they are released into the environment, not only for pollution prevention but also for waste minimization. Many physicochemical methods have been developed for metal removal from aqueous solutions, including chemical coagulation, adsorption, extraction, ion exchange and membrane separation; however, these methods are generally not metal selective. Bacteria, because they contain metal transporters, provide a potentially competitive alternative to the current use of expensive and high-volume ion-exchange resins.

resultsThe feasibility of using bacterial biofilters as efficient tools for nickel and cobalt ions specific remediation was investigated. Among the factors susceptible to genetic modification in Escherichia coli, specific efflux and sequestration systems were engineered to improve its metal sequestration abilities. Genomic suppression of the RcnA nickel (Ni) and cobalt (Co) efflux system was combined with the plasmid-controlled expression of a genetically improved version of a specific metallic transporter, NiCoT, which originates from Novosphingobium aromaticivorans. The resulting strain exhibited enhanced nickel (II) and cobalt (II) uptake, with a maximum metal ion accumulation of 6 mg/g bacterial dry weight during 10 min of treatment. A synthetic adherence operon was successfully introduced into the plasmid carrying the improved NiCoT transporter, conferring the ability to form thick biofilm structures, especially when exposed to nickel and cobalt metallic compounds.

conclusionsThis study demonstrates the efficient use of genetic engineering to increase metal sequestration and biofilm formation by E. coli. This method allows Co and Ni contaminants to be sequestered while spatially confining the bacteria to an abiotic support. Biofiltration of nickel (II) and cobalt (II) by immobilized cells is therefore a promising option for treating these contaminants at an industrial scale.

Indexed as

BiofilmBiofilterBioremediationCobaltNickelNiCoTSynthetic biology

Identifiers

PMID25104972
PMCPMC4124493
OpenAlexW2123193649

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.