Evidence map›Paper›PMID 25104607›Full record

ArticleJournal of molecular neuroscience : MN2015

Global transcriptome profiling of genes that are differentially regulated during differentiation of mouse embryonic neural stem cells into astrocytes.

Dalmuri Han, Mi Ran Choi, Kyoung Hwa Jung, Namshin Kim, Se Kye Kim, Jin Choul Chai, Young Seek Lee, Young Gyu Chai

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In one paragraph

Article in Journal of molecular neuroscience : MN, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Dalmuri HanDepartment of Molecular and Life Science, Hanyang University, Ansan, 426-791, Korea.
Mi Ran ChoiDepartment of Molecular and Life Science, Hanyang University, Ansan, 426-791, Korea.
Kyoung Hwa JungDepartment of Molecular and Life Science, Hanyang University, Ansan, 426-791, Korea.
Namshin KimKorean Bioinformation Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 305-806, Korea.
Se Kye KimDepartment of Molecular and Life Science, Hanyang University, Ansan, 426-791, Korea.
Jin Choul ChaiDepartment of Molecular and Life Science, Hanyang University, Ansan, 426-791, Korea.
Young Seek LeeDepartment of Molecular and Life Science, Hanyang University, Ansan, 426-791, Korea.
Young Gyu ChaiDepartment of Molecular and Life Science, Hanyang University, Ansan, 426-791, Korea. ygchai@hanyang.ac.kr.
Hanyang University · KRKorea Research Institute of Bioscience and Biotechnology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many genes are associated with the differentiation of neural stem cells (NSCs) into astrocytes, the most abundant and functionally diverse population of glial cells in the central nervous system, particularly in the brain. In the present study, we differentiated NSCs from the forebrain of embryonic day 14.5 mouse embryos into astrocytes over 1 and 7 days. We identified transcriptomes of NSCs and astrocytes using RNA sequencing and analyzed enriched gene networks, signal pathways, and ontology. To identify important regulators of differentiation, we performed gene clustering according to expression patterns and promoter CG types. Our data show that genes related to system development, including Fbln2, Bcan, Ncam1, Itih3, Tnr, and Vcan, regulate NSC differentiation through WNT/beta-catenin and epithelial to mesenchymal transition pathways. We identified many CG-rich promoter genes related to basic cellular maintenance such as transcription, translation, and structural components and CG-poor promoter genes that are highly associated with cell-type-specific functions or play important roles during development. Our study provides a foundation for further research on NSC differentiation and the future application of stem cells.

Indexed as

Gene Expression Regulation, DevelopmentalNeurogenesisTranscriptomeAnimalsAstrocytesCells, CulturedEmbryonic Stem CellsGene Expression ProfilingMiceNeural Stem CellsWnt Signaling Pathway

Identifiers

PMID25104607
OpenAlexW2107290580

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.