Evidence map›Paper›PMID 25103589›Full record

ArticleBMC neuroscience2014

Sox2 acts as a transcriptional repressor in neural stem cells.

Yu-Ru Liu, Zulfiqar A Laghari, Carolina A Novoa, Jaime Hughes, Jamie R M Webster, Paul E Goodwin, Sally P Wheatley, Paul J Scotting

Abstract read
In one paragraph

Article in BMC neuroscience, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yu-Ru Liu
Zulfiqar A Laghari
Carolina A Novoa
Jaime Hughes
Jamie R M Webster
Paul E Goodwin
Sally P Wheatley
Paul J ScottingCentre for Genetics and Genomics, School of Life Sciences, Queen's Medical Centre, Nottingham NG7 2UH, England. paul.scotting@nottingham.ac.uk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe transcription factor, Sox2, is central to the behaviour of neural stem cells. It is also one of the key embryonic stem cell factors that, when overexpressed can convert somatic cells into induced pluripotent cells. Although generally studied as a transcriptional activator, recent evidence suggests that it might also repress gene expression.

resultsWe show that in neural stem cells Sox2 represses as many genes as it activates. We found that Sox2 interacts directly with members of the groucho family of corepressors and that repression of several target genes required this interaction. Strikingly, where many of the genes activated by Sox2 encode transcriptional regulators, no such genes were repressed. Finally, we found that a mutant form of Sox2 that was unable to bind groucho was no longer able to inhibit differentiation of neural stem cells to the same extent as the wild type protein.

conclusionsThese data reveal a major new mechanism of action for this key transcription factor. In the context of our understanding of endogenous stem cells, this highlights the need to determine how such a central regulator can distinguish which genes to activate and which to repress.

Indexed as

AnimalsCell LineChlorocebus aethiopsCo-Repressor ProteinsCOS CellsHumansMiceMicroarray AnalysisMutationNeural Stem CellsNeurogenesisSOXB1 Transcription FactorsTranscription, GeneticTransfectionCo-Repressor ProteinsSOX2 protein, humanSox2 protein, mouseSOXB1 Transcription Factors

Identifiers

PMID25103589
PMCPMC4148960

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.