Evidence map›Paper›PMID 25103409›Full record

ArticleScience (New York, N.Y.)2014

Structural biology. Crystal structure of the CRISPR RNA-guided surveillance complex from Escherichia coli.

Ryan N Jackson, Sarah M Golden, Paul B G van Erp, Joshua Carter, Edze R Westra, Stan J J Brouns, John van der Oost, Thomas C Terwilliger, Randy J Read, Blake Wiedenheft

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 157 papers.

0numbers the graph read from it
0cells of the map it votes in
157citing papers in PubMed
14.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

157 citing papers in PubMed, 256 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Structural characterization of anti-CRISPR protein AcrIE9.Structural dynamics (Melville, N.Y.) · 2025
    Article
  7. CRISPR adaptation inmSphere · 2025
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article

97 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Ryan N JacksonDepartment of Microbiology and Immunology, Montana State University, Bozeman, MT 59717, USA.
Sarah M GoldenDepartment of Microbiology and Immunology, Montana State University, Bozeman, MT 59717, USA.
Paul B G van ErpDepartment of Microbiology and Immunology, Montana State University, Bozeman, MT 59717, USA.
Joshua CarterDepartment of Microbiology and Immunology, Montana State University, Bozeman, MT 59717, USA.
Edze R WestraLaboratory of Microbiology, Department of Agrotechnology and Food Sciences, Wageningen University, Dreijenplein 10, 6703 HB Wageningen, Netherlands.
Stan J J BrounsLaboratory of Microbiology, Department of Agrotechnology and Food Sciences, Wageningen University, Dreijenplein 10, 6703 HB Wageningen, Netherlands.
John van der OostLaboratory of Microbiology, Department of Agrotechnology and Food Sciences, Wageningen University, Dreijenplein 10, 6703 HB Wageningen, Netherlands.
Thomas C TerwilligerBioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87545, USA.
Randy J ReadDepartment of Haematology, University of Cambridge, Cambridge Institute for Medical Research, Cambridge CB2 0XY, UK.
Blake WiedenheftDepartment of Microbiology and Immunology, Montana State University, Bozeman, MT 59717, USA. bwiedenheft@gmail.com.
Montana State University · USWageningen University & Research · NLLos Alamos National Laboratory · USUniversity of Cambridge · GB

Funding

PROJECT 5 - DUKE - STRUCTURE VALIDATION AND IMPROVEMENT FOR PROTEINS AND N. ACIDSP01GM063210 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI ADAMS, PAUL DAVID · 2001 to 2021
$33.5M
X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Center for Zoonotic and Emerging Infectious DiseasesP20GM103500 · NIGMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI QUINN, MARK T · 2012 to 2013
$4.2M
Structure, Function and Application of CRISPR RNA-guided Immunity in BacteriaR01GM108888 · NIGMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI WIEDENHEFT, BLAKE A · 2014 to 2019
$1.6M
Structural and Kinetic Basis of RNA-guided Adaptive Immunity in BacteriaF32GM108436 · NIGMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI JACKSON, RYAN NEAL · 2014 to 2015
$106k
Howard Hughes Medical Institute 52006931NIGMS NIH HHS F32 GM108436NIGMS NIH HHS GM063210NIGMS NIH HHS P01 GM063210NIGMS NIH HHS P20 GM103500NIGMS NIH HHS P20GM103500NIGMS NIH HHS P41 GM103393NIGMS NIH HHS P41GM103393NIGMS NIH HHS R01 GM108888NIGMS NIH HHS R01GM108888NIGMS NIH HHS Y1-GM-1104Wellcome Trust 082961Wellcome Trust 082961/Z/07/ZWellcome Trust 100140
6 · The paper itself

Abstract

Clustered regularly interspaced short palindromic repeats (CRISPRs) are essential components of RNA-guided adaptive immune systems that protect bacteria and archaea from viruses and plasmids. In Escherichia coli, short CRISPR-derived RNAs (crRNAs) assemble into a 405-kilodalton multisubunit surveillance complex called Cascade (CRISPR-associated complex for antiviral defense). Here we present the 3.24 angstrom resolution x-ray crystal structure of Cascade. Eleven proteins and a 61-nucleotide crRNA assemble into a seahorse-shaped architecture that binds double-stranded DNA targets complementary to the crRNA-guide sequence. Conserved sequences on the 3' and 5' ends of the crRNA are anchored by proteins at opposite ends of the complex, whereas the guide sequence is displayed along a helical assembly of six interwoven subunits that present five-nucleotide segments of the crRNA in pseudo-A-form configuration. The structure of Cascade suggests a mechanism for assembly and provides insights into the mechanisms of target recognition.

Indexed as

Clustered Regularly Interspaced Short Palindromic RepeatsCRISPR-Cas SystemsCRISPR-Associated ProteinsCrystallography, X-RayEscherichia coliEscherichia coli ProteinsRNA, BacterialRNA EditingRNA, Small UntranslatedCRISPR-Associated ProteinsEscherichia coli ProteinsRNA, BacterialRNA, Small Untranslated

Identifiers

PMID25103409
PMCPMC4188430
OpenAlexW1978942464

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.