Evidence map›Paper›PMID 25103039›Full record

ArticleBiomedical engineering online2014

Calibration and segmentation of skin areas in hyperspectral imaging for the needs of dermatology.

Robert Koprowski, Sławomir Wilczyński, Zygmunt Wróbel, Barbara Błońska-Fajfrowska

Abstract read
In one paragraph

Article in Biomedical engineering online, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Robert KoprowskiDepartment of Biomedical Computer Systems, Faculty of Computer Science and Materials Science, University of Silesia, Institute of Computer Science, ul, Będzińska 39, Sosnowiec 41-200, Poland. robert.koprowski@us.edu.pl.
Sławomir Wilczyński
Zygmunt Wróbel
Barbara Błońska-Fajfrowska

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionAmong the currently known imaging methods, there exists hyperspectral imaging. This imaging fills the gap in visible light imaging with conventional, known devices that use classical CCDs. A major problem in the study of the skin is its segmentation and proper calibration of the results obtained. For this purpose, a dedicated automatic image analysis algorithm is proposed by the paper's authors. MATERIAL AND

methodThe developed algorithm was tested on data acquired with the Specim camera. Images were related to different body areas of healthy patients. The resulting data were anonymized and stored in the output format, source dat (ENVI File) and raw. The frequency λ of the data obtained ranged from 397 to 1030 nm. Each image was recorded every 0.79 nm, which in total gave 800 2D images for each subject. A total of 36'000 2D images in dat format and the same number of images in the raw format were obtained for 45 full hyperspectral measurement sessions. As part of the paper, an image analysis algorithm using known analysis methods as well as new ones developed by the authors was proposed. Among others, filtration with a median filter, the Canny filter, conditional opening and closing operations and spectral analysis were used. The algorithm was implemented in Matlab and C and is used in practice.

resultsThe proposed method enables accurate segmentation for 36'000 measured 2D images at the level of 7.8%. Segmentation is carried out fully automatically based on the reference ray spectrum. In addition, brightness calibration of individual 2D images is performed for the subsequent wavelengths. For a few segmented areas, the analysis time using Intel Core i5 CPU RAM M460@2.5GHz 4GB does not exceed 10 s.

conclusionsThe obtained results confirm the usefulness of the applied method for image analysis and processing in dermatological practice. In particular, it is useful in the quantitative evaluation of skin lesions. Such analysis can be performed fully automatically without operator's intervention.

Indexed as

AlgorithmsCalibrationDermatologyDiagnostic ImagingHumansImage Processing, Computer-AssistedModels, TheoreticalSkin

Identifiers

PMID25103039
PMCPMC4243423

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.