Evidence map›Paper›PMID 25102102›Full record

ArticleAging2014

A metabolic strategy to enhance long-term survival by Phx1 through stationary phase-specific pyruvate decarboxylases in fission yeast.

Ji-Yoon Kim, Eun-Jung Kim, Luis Lopez-Maury, Jürg Bähler, Jung-Hye Roe

Open access · hybridAbstract read
In one paragraph

Article in Aging, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Proteomic and Secretomic Response of an AfricanJournal of proteome research · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Extension of chronological lifespan in Schizosaccharomyces pombe.Genes to cells : devoted to molecular & cellular mechanisms · 2021
    Review
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 4 countries.

Ji-Yoon KimLaboratory of Molecular Microbiology, School of Biological Sciences, and Institute of Microbiology, Seoul National University, Seoul 151-747;
Eun-Jung KimLaboratory of Molecular Microbiology, School of Biological Sciences, and Institute of Microbiology, Seoul National University, Seoul 151-747;
Luis Lopez-MauryUniversity College London, Department of Genetics, Evolution and Environment, Darwin Building, Gower Street London WC1E 6BT, United Kingdom; Instituto de Bioquímica Vegetal y Fotosíntesis, CSIC-Universidad de Sevilla, Avenida Américo Vespucio, s/n, 41092 - Sevilla, Spain.
Jürg BählerUniversity College London, Department of Genetics, Evolution and Environment, Darwin Building, Gower Street London WC1E 6BT, United Kingdom;
Jung-Hye RoeLaboratory of Molecular Microbiology, School of Biological Sciences, and Institute of Microbiology, Seoul National University, Seoul 151-747;
Seoul National University · KRCzech Academy of Sciences, Institute of Microbiology · CZUniversidad de Sevilla · ESUniversity College London · GB

Funding

Wellcome Trust 095598
6 · The paper itself

Abstract

In the fission yeast Schizosaccharomyces pombe, the stationary phase-specific transcription factor Phx1 contributes to long-term survival, stress tolerance, and meiosis. We identified Phx1-dependent genes through transcriptome analysis, and further analyzed those related with carbohydrate and thiamine metabolism, whose expression decreased in ∆phx1. Consistent with mRNA changes, the level of thiamine pyrophosphate (TPP) and TPP-utilizing pyruvate decarboxylase activity that converts pyruvate to acetaldehyde were also reduced in the mutant. Therefore, Phx1 appears to shift metabolic flux by diverting pyruvate from the TCA cycle and respiration to ethanol fermentation. Among the four predicted genes for pyruvate decarboxylase, only the Phx1-dependent genes (pdc201+ and pdc202+) contributed to long-term survival as judged by mutation and overexpression studies. These findings indicate that the Phx1-mediated long-term survival is achieved primarily through increasing the synthesis and activity of pyruvate decarboxylase. Consistent with this hypothesis, we observed that Phx1 curtailed respiration when cells entered stationary phase. Introduction of Δphx1 mutation compromised the long-lived phenotypes of Δpka1 and Δsck2 mutants that are devoid of pro-aging kinases of nutrient-signalling pathways, and of the Δpyp1 mutant with constitutively activated stress-responsive kinase Sty1. Therefore, achievement of long-term viability through both nutrient limitation and anti-stress response appears to be dependent on Phx1.

Indexed as

Fungal ProteinsGene Expression Regulation, EnzymologicGene Expression Regulation, FungalMitochondriaMutationOxygen ConsumptionPhylogenyPyruvate DecarboxylaseReactive Oxygen SpeciesSchizosaccharomycesStress, PhysiologicalThiamineTime FactorsTranscription FactorsTranscriptomeFungal ProteinsPyruvate DecarboxylaseReactive Oxygen SpeciesThiamineTranscription Factors

Identifiers

PMID25102102
PMCPMC4153625
OpenAlexW2150720966

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.