Evidence map›Paper›PMID 25099734›Full record

ArticleAmerican journal of physiology. Cell physiology2014

Transcriptional regulation of α1H T-type calcium channel under hypoxia.

Hassan Sellak, Chun Zhou, Bainan Liu, Hairu Chen, Thomas M Lincoln, Songwei Wu

Open access · greenAbstract read
In one paragraph

Article in American journal of physiology. Cell physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Hassan SellakDepartment of Anesthesiology and Perioperative Medicine, Georgia Regents University, Augusta, Georgia;
Chun ZhouCenter for Lung Biology, University of South Alabama, Mobile, Alabama; Department of Pharmacology, University of South Alabama, Mobile, Alabama; and.
Bainan LiuCenter for Lung Biology, University of South Alabama, Mobile, Alabama; Department of Pharmacology, University of South Alabama, Mobile, Alabama; and.
Hairu ChenDepartment of Anesthesiology and Perioperative Medicine, Georgia Regents University, Augusta, Georgia;
Thomas M LincolnDepartment of Physiology, University of South Alabama, Mobile, Alabama.
Songwei WuDepartment of Anesthesiology and Perioperative Medicine, Georgia Regents University, Augusta, Georgia; sowu@gru.edu.
University of South Alabama · USAugusta University · USGeorgia Regents Medical Center · US

Funding

T-type Calcium Channels and von Willebrand Factor ReleaseP01HL066299 · NHLBI · UNIVERSITY OF SOUTH ALABAMA · PI LEAVESLEY, SILAS JOSIAH · 2001 to 2022
$34.6M
NHLBI NIH HHS HL66299NHLBI NIH HHS P01 HL066299
6 · The paper itself

Abstract

The low-voltage-activated T-type Ca(2+) channels play an important role in mediating the cellular responses to altered oxygen tension. Among three T-type channel isoforms, α1G, α1H, and α1I, only α1H was found to be upregulated under hypoxia. However, mechanisms underlying such hypoxia-dependent isoform-specific gene regulation remain incompletely understood. We, therefore, studied the hypoxia-dependent transcriptional regulation of α1G and α1H gene promoters with the aim to identify the functional hypoxia-response elements (HREs). In rat pulmonary artery smooth muscle cells (PASMCs) and pheochromocytoma (PC12) cells after hypoxia (3% O2) exposure, we observed a prominent increase in α1H mRNA at 12 h along with a significant rise in α1H-mediated T-type current at 24 and 48 h. We then cloned two promoter fragments from the 5'-flanking regions of rat α1G and α1H gene, 2,000 and 3,076 bp, respectively, and inserted these fragments into a luciferase reporter vector. Transient transfection of PASMCs and PC12 cells with these recombinant constructs and subsequent luciferase assay revealed a significant increase in luciferase activity from the reporter containing the α1H, but not α1G, promoter fragment under hypoxia. Using serial deletion and point mutation analysis strategies, we identified a functional HRE at site -1,173cacgc-1,169 within the α1H promoter region. Furthermore, an electrophoretic mobility shift assay using this site as a DNA probe demonstrated an increased binding activity to nuclear protein extracts from the cells after hypoxia exposure. Taken together, these findings indicate that hypoxia-induced α1H upregulation involves binding of hypoxia-inducible factor to an HRE within the α1H promoter region.

Indexed as

Transcription, GeneticAnimalsBinding SitesCalcium Channels, T-TypeCell HypoxiaMembrane PotentialsMuscle, Smooth, VascularMutationMyocytes, Smooth MusclePC12 CellsPulmonary ArteryPulmonary VeinsRatsResponse ElementsRNA, MessengerTime FactorsCacna1g protein, ratCacna1h protein, ratCalcium Channels, T-TypeRNA, Messengergene expressionhypoxiahypoxia-response elementT-type calcium channel

Identifiers

PMID25099734
PMCPMC4187058
OpenAlexW2320240148

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.