Evidence map›Paper›PMID 25099378›Full record

ArticleMolecular plant pathology2015

Identification and functional analysis of Penicillium digitatum genes putatively involved in virulence towards citrus fruit.

Mario López-Pérez, Ana-Rosa Ballester, Luis González-Candelas

Open access · bronzeAbstract read
In one paragraph

Article in Molecular plant pathology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
7.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 81 citations in OpenAlex.

  1. Green Mold of Citrus: Recent Insights intoJournal of agricultural and food chemistry · 2026
    Review
  2. An Overview of MajorJournal of fungi (Basel, Switzerland) · 2026
    Review
  3. Article
  4. A conserved fungal effector disturbs CaNature communications · 2025
    Article
  5. Article
  6. Article
  7. Discovery and Transcriptional Profiling ofJournal of fungi (Basel, Switzerland) · 2024
    Article
  8. Article
  9. Article
  10. In Silico Characterization of the Secretome of the Fungal PathogenJournal of fungi (Basel, Switzerland) · 2023
    Article
  11. The Role of ABA in the Interaction between Citrus Fruit andInternational journal of molecular sciences · 2022
    Article
  12. Article
  13. Deciphering Molecular Determinants UnderlyingInternational journal of molecular sciences · 2022
    Article
  14. Unveiling the Role Displayed byJournal of fungi (Basel, Switzerland) · 2021
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Mario López-PérezInstituto de Agroquímica y Tecnología de Alimentos (IATA-CSIC), Calle Catedrático Agustín Escardino 7, Paterna, 46980, Valencia, Spain.
Ana-Rosa Ballester
Luis González-Candelas
Instituto de Agroquímica y Tecnología de Alimentos · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The fungus Penicillium digitatum, the causal agent of green mould rot, is the most destructive post-harvest pathogen of citrus fruit in Mediterranean regions. In order to identify P. digitatum genes up-regulated during the infection of oranges that may constitute putative virulence factors, we followed a polymerase chain reaction (PCR)-based suppression subtractive hybridization and cDNA macroarray hybridization approach. The origin of expressed sequence tags (ESTs) was determined by comparison against the available genome sequences of both organisms. Genes coding for fungal proteases and plant cell wall-degrading enzymes represent the largest categories in the subtracted cDNA library. Northern blot analysis of a selection of P. digitatum genes, including those coding for proteases, cell wall-related enzymes, redox homoeostasis and detoxification processes, confirmed their up-regulation at varying time points during the infection process. Agrobacterium tumefaciens-mediated transformation was used to generate knockout mutants for two genes encoding a pectin lyase (Pnl1) and a naphthalene dioxygenase (Ndo1). Two independent P. digitatum Δndo1 mutants were as virulent as the wild-type. However, the two Δpnl1 mutants analysed were less virulent than the parental strain or an ectopic transformant. Together, these results provide a significant advance in our understanding of the putative determinants of the virulence mechanisms of P. digitatum.

Indexed as

Genes, FungalCitrusCloning, MolecularExpressed Sequence TagsFungal ProteinsGene Expression Regulation, FungalGene LibraryGene OntologyGene TargetingMolecular Sequence AnnotationMutationPenicilliumSequence Analysis, DNASubtractive Hybridization TechniquesTransformation, GeneticVirulenceFungal Proteinscell wall-degrading enzymesfruit-pathogen interactiongene expressiongene knockoutphytopathogenic fungiproteases

Identifiers

PMID25099378
PMCPMC6638479
OpenAlexW1589450808

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.