Evidence map›Paper›PMID 25096976›Full record

ArticlePlant physiology2014

Phototropin encoded by a single-copy gene mediates chloroplast photorelocation movements in the liverwort Marchantia polymorpha.

Aino Komatsu, Mika Terai, Kimitsune Ishizaki, Noriyuki Suetsugu, Hidenori Tsuboi, Ryuichi Nishihama, Katsuyuki T Yamato, Masamitsu Wada, Takayuki Kohchi

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
13.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 76 citations in OpenAlex.

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  7. Review
  8. Functions of COP1/SPA E3 Ubiquitin Ligase Mediated by MpCRY in the LiverwortInternational journal of molecular sciences · 2021
    Article
  9. Article
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  11. Review
  12. Article
  13. Plant science's next top models.Annals of botany · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Aino KomatsuGraduate School of Biostudies, Kyoto University, Kyoto 606-8502, Japan (A.K., M.T., K.I., N.S., R.N., K.T.Y., T.K.); andFaculty of Sciences, Kyushu University, Fukuoka 812-8581, Japan (N.S., H.T., M.W.).
Mika TeraiGraduate School of Biostudies, Kyoto University, Kyoto 606-8502, Japan (A.K., M.T., K.I., N.S., R.N., K.T.Y., T.K.); andFaculty of Sciences, Kyushu University, Fukuoka 812-8581, Japan (N.S., H.T., M.W.).
Kimitsune IshizakiGraduate School of Biostudies, Kyoto University, Kyoto 606-8502, Japan (A.K., M.T., K.I., N.S., R.N., K.T.Y., T.K.); andFaculty of Sciences, Kyushu University, Fukuoka 812-8581, Japan (N.S., H.T., M.W.).
Noriyuki SuetsuguGraduate School of Biostudies, Kyoto University, Kyoto 606-8502, Japan (A.K., M.T., K.I., N.S., R.N., K.T.Y., T.K.); andFaculty of Sciences, Kyushu University, Fukuoka 812-8581, Japan (N.S., H.T., M.W.).
Hidenori TsuboiGraduate School of Biostudies, Kyoto University, Kyoto 606-8502, Japan (A.K., M.T., K.I., N.S., R.N., K.T.Y., T.K.); andFaculty of Sciences, Kyushu University, Fukuoka 812-8581, Japan (N.S., H.T., M.W.).
Ryuichi NishihamaGraduate School of Biostudies, Kyoto University, Kyoto 606-8502, Japan (A.K., M.T., K.I., N.S., R.N., K.T.Y., T.K.); andFaculty of Sciences, Kyushu University, Fukuoka 812-8581, Japan (N.S., H.T., M.W.).
Katsuyuki T YamatoGraduate School of Biostudies, Kyoto University, Kyoto 606-8502, Japan (A.K., M.T., K.I., N.S., R.N., K.T.Y., T.K.); andFaculty of Sciences, Kyushu University, Fukuoka 812-8581, Japan (N.S., H.T., M.W.).
Masamitsu WadaGraduate School of Biostudies, Kyoto University, Kyoto 606-8502, Japan (A.K., M.T., K.I., N.S., R.N., K.T.Y., T.K.); andFaculty of Sciences, Kyushu University, Fukuoka 812-8581, Japan (N.S., H.T., M.W.).
Takayuki KohchiGraduate School of Biostudies, Kyoto University, Kyoto 606-8502, Japan (A.K., M.T., K.I., N.S., R.N., K.T.Y., T.K.); andFaculty of Sciences, Kyushu University, Fukuoka 812-8581, Japan (N.S., H.T., M.W.) tkohchi@lif.kyoto-u.ac.jp.
Kyushu University · JPKyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Blue-light-induced chloroplast photorelocation movement is observed in most land plants. Chloroplasts move toward weak-light-irradiated areas to efficiently absorb light (the accumulation response) and escape from strong-light-irradiated areas to avoid photodamage (the avoidance response). The plant-specific kinase phototropin (phot) is the blue-light receptor for chloroplast movements. Although the molecular mechanisms for chloroplast photorelocation movement have been analyzed, the overall aspects of signal transduction common to land plants are still unknown. Here, we show that the liverwort Marchantia polymorpha exhibits the accumulation and avoidance responses exclusively induced by blue light as well as specific chloroplast positioning in the dark. Moreover, in silico and Southern-blot analyses revealed that the M. polymorpha genome encodes a single PHOT gene, MpPHOT, and its knockout line displayed none of the chloroplast photorelocation movements, indicating that the sole MpPHOT gene mediates all types of movement. Mpphot was localized on the plasma membrane and exhibited blue-light-dependent autophosphorylation both in vitro and in vivo. Heterologous expression of MpPHOT rescued the defects in chloroplast movement of phot mutants in the fern Adiantum capillus-veneris and the seed plant Arabidopsis (Arabidopsis thaliana). These results indicate that Mpphot possesses evolutionarily conserved regulatory activities for chloroplast photorelocation movement. M. polymorpha offers a simple and versatile platform for analyzing the fundamental processes of phototropin-mediated chloroplast photorelocation movement common to land plants.

Indexed as

AdiantumAmino Acid SequenceCell MembraneChloroplastsColorGenetic Complementation TestMarchantiaMolecular Sequence DataPhosphorylationPhototropinsPlants, Genetically ModifiedPhototropins

Identifiers

PMID25096976
PMCPMC4149725
OpenAlexW1998717269

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.