Evidence map›Paper›PMID 25092173›Full record

ArticleScientific reports2014

NAD-dependent isocitrate dehydrogenase as a novel target of tributyltin in human embryonic carcinoma cells.

Shigeru Yamada, Yaichiro Kotake, Yosuke Demizu, Masaaki Kurihara, Yuko Sekino, Yasunari Kanda

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
6.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Redox regulation of the immune response.Cellular & molecular immunology · 2022
    Review
  4. Review
  5. A proteomic study of Cunninghamella echinulata recovery during exposure to tributyltin.Environmental science and pollution research international · 2019
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Shigeru YamadaDivision of Pharmacology, National Institute of Health Sciences, Tokyo, Japan.
Yaichiro KotakeGraduate School of Biomedical and Health Sciences, Hiroshima University, Hiroshima, Japan.
Yosuke DemizuDivision of Organic Chemistry, National Institute of Health Sciences, Tokyo, Japan.
Masaaki KuriharaDivision of Organic Chemistry, National Institute of Health Sciences, Tokyo, Japan.
Yuko SekinoDivision of Pharmacology, National Institute of Health Sciences, Tokyo, Japan.
Yasunari KandaDivision of Pharmacology, National Institute of Health Sciences, Tokyo, Japan.
National Institute of Health Sciences · JPHiroshima University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tributyltin (TBT) is known to cause developmental defects as endocrine disruptive chemicals (EDCs). At nanomoler concentrations, TBT actions were mediated by genomic pathways via PPAR/RXR. However, non-genomic target of TBT has not been elucidated. To investigate non-genomic TBT targets, we performed comprehensive metabolomic analyses using human embryonic carcinoma NT2/D1 cells. We found that 100 nM TBT reduced the amounts of α-ketoglutarate, succinate and malate. We further found that TBT decreased the activity of NAD-dependent isocitrate dehydrogenase (NAD-IDH), which catalyzes the conversion of isocitrate to α-ketoglutarate in the TCA cycle. In addition, TBT inhibited cell growth and enhanced neuronal differentiation through NAD-IDH inhibition. Furthermore, studies using bacterially expressed human NAD-IDH and in silico simulations suggest that TBT inhibits NAD-IDH due to a possible interaction. These results suggest that NAD-IDH is a novel non-genomic target of TBT at nanomolar levels. Thus, a metabolomic approach may provide new insights into the mechanism of EDC action.

Indexed as

Cell DifferentiationCell Line, TumorCitric Acid CycleEmbryo, MammalianEndocrine DisruptorsEnvironmental PollutantsHumansIsocitrate DehydrogenaseIsocitratesKetoglutaric AcidsMalatesMaleMolecular Docking SimulationNeuronsSuccinic AcidTestisEndocrine DisruptorsEnvironmental PollutantsIsocitrate DehydrogenaseIsocitratesisocitric acidKetoglutaric AcidsMalatesmalic acidSuccinic AcidTrialkyltin Compoundstributyltin

Identifiers

PMID25092173
PMCPMC4121607
OpenAlexW2059959216

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.