ReviewNature reviews. Genetics2014
Recent advances in genomic DNA sequencing of microbial species from single cells.
Review in Nature reviews. Genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
78 citing papers in PubMed, 156 citations in OpenAlex.
- CoSAG-nf: a scalable nextflow pipeline for co-assembly, optimization, and interactive visualization of high-throughput single-cell genomes.Bioinformatics (Oxford, England) · 2026Article
- Whole genome sequence analysis of Methylorubrum thiocyanatum VRI7-A4: a versatile sulfur-oxidizing bacterium with environmental stress resilience.Antonie van Leeuwenhoek · 2026Article
- MAGdb: a comprehensive high quality MAGs repository for exploring microbial metagenome-assemble genomes.Genome biology · 2025Article
- Optimization of Mapping Tools and Investigation of Ribosomal RNA Influence for Data-Driven Gene Expression Analysis in Complex Microbiomes.Microorganisms · 2025Article
- Liver abscess and septic shock due toFrontiers in medicine · 2025Article
- Closing the genome of unculturable cable bacteria using a combined metagenomic assembly of long and short sequencing reads.Microbial genomics · 2024Article
- PB-LKS: a python package for predicting phage-bacteria interaction through local K-mer strategy.Briefings in bioinformatics · 2024Article
- Navigating the archaeal frontier: insights and projections from bioinformatic pipelines.Frontiers in microbiology · 2024Article
- Severe pneumonia with empyema due to multiple anaerobic infections: case report and literature review.Frontiers in medicine · 2024Article
- Dissecting the human gut microbiome to better decipher drug liability: A once-forgotten organ takes center stage.Journal of advanced research · 2023Review
- SAG-RAD: A Method for Single-Cell Population Genomics of Unicellular Eukaryotes.Molecular biology and evolution · 2023Article
- A fast machine-learning-guided primer design pipeline for selective whole genome amplification.PLoS computational biology · 2023Article
- Aggregation-induced emission biomaterials for anti-pathogen medical applications: detecting, imaging and killing.Regenerative biomaterials · 2023Review
- Identification of housekeeping genes of Candidatus Branchiomonas cysticola associated with epitheliocystis in Atlantic salmon (Salmo salar L.).Archives of microbiology · 2022Article
- Prochlorococcus have low global mutation rate and small effective population size.Nature ecology & evolution · 2022Article
- Species-resolved sequencing of low-biomass or degraded microbiomes using 2bRAD-M.Genome biology · 2022Article
- Metabolomics-Microbiome Crosstalk in the Breast Cancer Microenvironment.Metabolites · 2021Review
- Identification of Microbiome Etiology Associated With Drug Resistance in Pleural Empyema.Frontiers in cellular and infection microbiology · 2021Article
- Synergies of Systems Biology and Synthetic Biology in Human Microbiome Studies.Frontiers in microbiology · 2021Review
- Single-Cell Genomics and the Oral Microbiome.Journal of dental research · 2020Review
18 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
2 authors at 1 institution in 1 country.
Funding
Abstract
The vast majority of microbial species remain uncultivated and, until recently, about half of all known bacterial phyla were identified only from their 16S ribosomal RNA gene sequence. With the advent of single-cell sequencing, genomes of uncultivated species are rapidly filling in unsequenced branches of the microbial phylogenetic tree. The wealth of new insights gained from these previously inaccessible groups is providing a deeper understanding of their basic biology, taxonomy and evolution, as well as their diverse roles in environmental ecosystems and human health.
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What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.