Evidence map›Paper›PMID 25089903›Full record

ArticlePloS one2014

Proteomic analysis of chinook salmon (Oncorhynchus tshawytscha) ovarian fluid.

Sheri L Johnson, Marsha Villarroel, Patrice Rosengrave, Alan Carne, Torsten Kleffmann, P Mark Lokman, Neil J Gemmell

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
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  5. Article
  6. Evolutionary consequences of environmental effects on gamete performance.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2021
    Review
  7. Egg-sperm interaction in sturgeon: role of ovarian fluid.Fish physiology and biochemistry · 2021
    Article
  8. The role of female reproductive fluid in sperm competition.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
  9. Article
  10. Post-ejaculatory modifications to sperm (PEMS).Biological reviews of the Cambridge Philosophical Society · 2020
    Review
  11. Article
  12. Article
  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sheri L JohnsonAllan Wilson Centre for Molecular Ecology and Evolution and Department of Anatomy, University of Otago, Dunedin, New Zealand; Department of Zoology, University of Otago, Dunedin, New Zealand.
Marsha VillarroelAllan Wilson Centre for Molecular Ecology and Evolution and Department of Anatomy, University of Otago, Dunedin, New Zealand.
Patrice RosengraveAllan Wilson Centre for Molecular Ecology and Evolution and Department of Anatomy, University of Otago, Dunedin, New Zealand.
Alan CarneCentre for Protein Research, Department of Biochemistry, University of Otago, Dunedin, New Zealand.
Torsten KleffmannCentre for Protein Research, Department of Biochemistry, University of Otago, Dunedin, New Zealand.
P Mark LokmanDepartment of Zoology, University of Otago, Dunedin, New Zealand.
Neil J GemmellAllan Wilson Centre for Molecular Ecology and Evolution and Department of Anatomy, University of Otago, Dunedin, New Zealand.
University of Otago · NZAllan Wilson Centre · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ovarian, or coelomic, fluid that is released with the egg mass of many fishes is increasingly found to play an important role in several biological processes crucial for reproductive success. These include maintenance of oocyte fertility and developmental competence, prolonging of sperm motility, and enhancing sperm swimming speed. Here we examined if and how the proteome of chinook salmon (Oncorhynchus tshawytscha) ovarian fluid varied among females and then sought to examine the composition of this fluid. Ovarian fluid in chinook salmon was analyzed using 1D SDS PAGE and LC-MS/MS tryptic digest screened against Mascot and Sequest databases. We found marked differences in the number and concentrations of proteins in salmon ovarian fluid across different females. A total of 174 proteins were identified in ovarian fluid, 47 of which were represented by six or more peptides, belonging to one of six Gene Ontology pathways. The response to chemical stimulus and response to hypoxia pathways were best represented, accounting for 26 of the 174 proteins. The current data set provides a resource that furthers our understanding of those factors that influence successful egg production and fertilisation in salmonids and other species.

Indexed as

ProteomicsAnimalsBody FluidsFemaleGene Expression RegulationOvarian FollicleProtein BiosynthesisReproductionSalmonTandem Mass Spectrometry

Identifiers

PMID25089903
PMCPMC4121310
OpenAlexW2068045891

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.