Evidence map›Paper›PMID 25088465›Full record

ArticleMolecular and cellular endocrinology2014

Reciprocal occupancy of BCL6 and STAT5 on Growth Hormone target genes: contrasting transcriptional outcomes and promoter-specific roles of p300 and HDAC3.

Grace Lin, Christopher R LaPensee, Zhaohui S Qin, Jessica Schwartz

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular endocrinology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

  1. B Cell Lymphoma 6 (BCL6): A Conserved Regulator of Immunity and Beyond.International journal of molecular sciences · 2024
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Loss of DBC1 (CCAR2) affects TNFα-induced lipolysis andJournal of molecular endocrinology · 2018
    Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Grace LinCellular & Molecular Biology Program, University of Michigan, Ann Arbor, MI, USA; Department of Molecular & Integrative Physiology, University of Michigan, Ann Arbor, MI, USA.
Christopher R LaPenseeDepartment of Molecular & Integrative Physiology, University of Michigan, Ann Arbor, MI, USA.
Zhaohui S QinDepartment of Biostatistics and Bioinformatics, Emory University, Atlanta, GA, USA.
Jessica SchwartzDepartment of Molecular & Integrative Physiology, University of Michigan, Ann Arbor, MI, USA. Electronic address: jeschwar@umich.edu.
University of Michigan–Ann Arbor · USEmory University · US

Funding

Regional Pilot And Feasibility Study Grants ProgramP30DK020572 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Mehboob A Hussain · 2013 to 2026
$24.3M
CELLULAR AND MOLECULAR BIOLOGY AT MICHIGANT32GM007315 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PUTHENVEEDU, MANOJKUMAR A · 1985 to 2021
$12.8M
TRAINING PROGRAM IN ORGANOGENESIST32HD007505 · NICHD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PASCA DI MAGLIANO, MARINA, SPENCE, JASON · 1997 to 2021
$6.9M
GROWTH HORMONE SIGNALING TO THE NUCLEUSR01DK046072 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SCHWARTZ, JESSICA · 1996 to 2010
$2.3M
Model-Based Methods for Analyzing ChIP Sequencing DataR01HG005119 · NHGRI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI QIN, ZHAOHUI · 2009 to 2012
$1.2M
NHGRI NIH HHS HG005119NHGRI NIH HHS R01 HG005119NICHD NIH HHS (NIH T32 HD007505NICHD NIH HHS T32 HD007505NIDDK NIH HHS DK46072NIDDK NIH HHS P30 DK020572NIDDK NIH HHS R01 DK046072NIGMS NIH HHS NIH T32 GM07315NIGMS NIH HHS T32 GM007315
6 · The paper itself

Abstract

Expression of the Growth Hormone (GH)-stimulated gene Socs2 (Suppressor of Cytokine Signaling 2) is mediated by the transcription activator STAT5 (Signal Transducer and Activator of Transcription 5) and the transcription repressor BCL6 (B-Cell Lymphoma 6). ChIP-Sequencing identified Cish (Cytokine-Inducible SH2-containing protein) and Bcl6 as having similar patterns of reciprocal occupancy by BCL6 and STAT5 in response to GH, though GH stimulates Cish and inhibits Bcl6 expression. The co-activator p300 occupied Socs2, Cish and Bcl6 promoters, and enhanced STAT5-mediated activation of Socs2 and Cish. In contrast, on Bcl6, p300 functioned as a repressor and inhibited in conjunction with STAT5 or BCL6. The co-repressor HDAC3 (Histone deacetylase 3) inhibited the Socs2, Cish and Bcl6 promoters in the presence of STAT5. Thus transcriptional outcomes on GH-regulated genes occupied by BCL6 and STAT5 are determined in a promoter-specific fashion by co-regulatory proteins which mediate the distinction between activating and repressive transcription factors.

Indexed as

AnimalsCell LineDNA-Binding ProteinsE1A-Associated p300 ProteinGene Expression RegulationGrowth HormoneHistone Deacetylase 3Histone DeacetylasesMiceProto-Oncogene Proteins c-bcl-6Response ElementsSTAT5 Transcription FactorTranscription, GeneticBcl6 protein, mouseDNA-Binding ProteinsE1A-Associated p300 ProteinEp300 protein, mouseGrowth HormoneHistone Deacetylase 3Histone DeacetylasesProto-Oncogene Proteins c-bcl-6STAT5 Transcription FactorAdipocytesChIP-SeqCishCo-activatorCo-repressorSocs2

Identifiers

PMID25088465
PMCPMC4176921
OpenAlexW2094893447

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.