Evidence map›Paper›PMID 25087050›Full record

ArticleBioorganic & medicinal chemistry2014

Structural optimization of a retrograde trafficking inhibitor that protects cells from infections by human polyoma- and papillomaviruses.

Daniel W Carney, Christian D S Nelson, Bennett D Ferris, Julia P Stevens, Alex Lipovsky, Teymur Kazakov, Daniel DiMaio, Walter J Atwood, Jason K Sello

Open access · greenAbstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
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  10. 2,3-Dihydroquinazolin-4(1RSC advances · 2018
    Review
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  15. Review
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  18. Review
  19. An animal model for progressive multifocal leukoencephalopathy.The Journal of clinical investigation · 2014
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Daniel W CarneyDepartment of Chemistry, Brown University, 324 Brook Street, Providence, RI 02912, United States.
Christian D S NelsonDepartment of Molecular Biology, Cell Biology, and Biochemistry, Brown University, 185 Meeting Street, Providence, RI 02912, United States.
Bennett D FerrisDepartment of Chemistry, Brown University, 324 Brook Street, Providence, RI 02912, United States.
Julia P StevensDepartment of Chemistry, Brown University, 324 Brook Street, Providence, RI 02912, United States.
Alex LipovskyDepartment of Genetics, Yale University School of Medicine, 333 Cedar Street, New Haven, CT 06510, United States.
Teymur KazakovDepartment of Genetics, Yale University School of Medicine, 333 Cedar Street, New Haven, CT 06510, United States.
Daniel DiMaioDepartment of Genetics, Yale University School of Medicine, 333 Cedar Street, New Haven, CT 06510, United States.
Walter J AtwoodDepartment of Molecular Biology, Cell Biology, and Biochemistry, Brown University, 185 Meeting Street, Providence, RI 02912, United States.
Jason K SelloDepartment of Chemistry, Brown University, 324 Brook Street, Providence, RI 02912, United States. Electronic address: jason_sello@brown.edu.
Brown University · USYale University · US

Funding

VIRAL SMALL RNPS--ROLES IN CELL TRANSFORMATIONP01CA016038 · NCI · YALE UNIVERSITY · PI DIMAIO, DANIEL C. · 1985 to 2020
$25.6M
SYNTHETIC CHEMISTRY COREP01NS065719 · NINDS · BROWN UNIVERSITY · PI ATWOOD, WALTER J · 2009 to 2018
$12.3M
Virus-Host Cell Interactions in AIDS-Associated PMLR01NS043097 · NINDS · BROWN UNIVERSITY · PI ATWOOD, WALTER J · 2002 to 2020
$6.1M
Center for Cancer Signaling NetworksP30GM103410 · NIGMS · BROWN UNIVERSITY · PI ATWOOD, WALTER J · 2012 to 2015
$4.3M
Release and trafficking of JC polyomavirus genomes and implications in AIDSF32NS070687 · NINDS · BROWN UNIVERSITY · PI NELSON, CHRISTIAN DOUGLAS STUART · 2010 to 2012
$153k
The Role of Viral Receptors in JCV Reactivation and Progression to PML in AIDSF32NS064870 · NINDS · BROWN UNIVERSITY · PI MAGINNIS, MELISSA · 2009 to 2011
$151k
NCI NIH HHS P01 CA016038NCI NIH HHS P01CA16038NIGMS NIH HHS P30 GM103410NIGMS NIH HHS P30GM103410NINDS NIH HHS F32 NS064870NINDS NIH HHS F32NS064870NINDS NIH HHS F32 NS070687NINDS NIH HHS F32NS070687NINDS NIH HHS P01 NS065719NINDS NIH HHS P01NS065719NINDS NIH HHS R01 NS043097NINDS NIH HHS R01NS043097
6 · The paper itself

Abstract

Human polyoma- and papillomaviruses are non-enveloped DNA viruses that cause severe pathologies and mortalities. Under circumstances of immunosuppression, JC polyomavirus causes a fatal demyelinating disease called progressive multifocal leukoencephalopathy (PML) and the BK polyomavirus is the etiological agent of polyomavirus-induced nephropathy and hemorrhagic cystitis. Human papillomavirus type 16, another non-enveloped DNA virus, is associated with the development of cancers in tissues like the uterine cervix and oropharynx. Currently, there are no approved drugs or vaccines to treat or prevent polyomavirus infections. We recently discovered that the small molecule Retro-2(cycl), an inhibitor of host retrograde trafficking, blocked infection by several human and monkey polyomaviruses. Here, we report diversity-oriented syntheses of Retro-2(cycl) and evaluation of the resulting analogs using an assay of human cell infections by JC polyomavirus. We defined structure-activity relationships and also discovered analogs with significantly improved potency as suppressors of human polyoma- and papillomavirus infection in vitro. Our findings represent an advance in the development of drug candidates that can broadly protect humans from non-enveloped DNA viruses and toxins that exploit retrograde trafficking as a means for cell entry.

Indexed as

Axonal TransportCell LineDose-Response Relationship, DrugHumansJC VirusMolecular StructureNeuronsPapillomaviridaeQuinazolinesStructure-Activity RelationshipVirus InternalizationQuinazolinesDihydroquinazolinonePapillomavirusPolyomavirusRetrograde traffickingSAR

Identifiers

PMID25087050
PMCPMC4378546
OpenAlexW1995477396

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.