Evidence map›Paper›PMID 25086771›Full record

ArticleThe Journal of membrane biology2014

Amphipol-mediated screening of molecular orthoses specific for membrane protein targets.

Yann Ferrandez, Manuela Dezi, Mickael Bosco, Agathe Urvoas, Marie Valerio-Lepiniec, Christel Le Bon, Fabrice Giusti, Isabelle Broutin, Grégory Durand, Ange Polidori and 3 more

Abstract read
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In one paragraph

Article in The Journal of membrane biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Amphipols for each season.The Journal of membrane biology · 2014
    Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Yann FerrandezLaboratoire de Modélisation et Ingénierie des Protéines, IBBMC UMR 8619, CNRS/Université Paris Sud, 91405, Orsay, France.
Manuela Dezi
Mickael Bosco
Agathe Urvoas
Marie Valerio-Lepiniec
Christel Le Bon
Fabrice Giusti
Isabelle Broutin
Grégory Durand
Ange Polidori
Jean-Luc Popot
Martin Picard
Philippe Minard

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Specific, tight-binding protein partners are valuable helpers to facilitate membrane protein (MP) crystallization, because they can i) stabilize the protein, ii) reduce its conformational heterogeneity, and iii) increase the polar surface from which well-ordered crystals can grow. The design and production of a new family of synthetic scaffolds (dubbed αReps, for "artificial alpha repeat protein") have been recently described. The stabilization and immobilization of MPs in a functional state are an absolute prerequisite for the screening of binders that recognize specifically their native conformation. We present here a general procedure for the selection of αReps specific of any MP. It relies on the use of biotinylated amphipols, which act as a universal "Velcro" to stabilize, and immobilize MP targets onto streptavidin-coated solid supports, thus doing away with the need to tag the protein itself.

Indexed as

Peptide LibraryCell MembraneHydrophobic and Hydrophilic InteractionsMembrane ProteinsPeptidesProtein BindingProtein Interaction MappingProtein TransportSolubilitySurface-Active AgentsTissue ScaffoldsMembrane ProteinsPeptide LibraryPeptidesSurface-Active Agents

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.