Evidence map›Paper›PMID 25085922›Full record

ArticleG3 (Bethesda, Md.)2014

Endogenous retrovirus insertion in the KIT oncogene determines white and white spotting in domestic cats.

Victor A David, Marilyn Menotti-Raymond, Andrea Coots Wallace, Melody Roelke, James Kehler, Robert Leighty, Eduardo Eizirik, Steven S Hannah, George Nelson, Alejandro A Schäffer and 3 more

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

  1. Blue eyes in Felis catus: genetics and health impacts.Companion animal health and genetics · 2026
    Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Genetic Testing: practical dos and don'ts for cats.Journal of feline medicine and surgery · 2024
    Review
  8. Article
  9. Article
  10. Article
  11. Domestication GeneInternational journal of molecular sciences · 2024
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Prevalence of Varied Coat Coloration in a Yellow-Throated Marten (Animals : an open access journal from MDPI · 2021
    Article
  18. A retroviral insertion in the tyrosinase (Journal of animal science and technology · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Victor A DavidLaboratory of Genomic Diversity, Center for Cancer Research, National Cancer Institute, Frederick, Maryland 21702.
Marilyn Menotti-RaymondLaboratory of Genomic Diversity, Center for Cancer Research, National Cancer Institute, Frederick, Maryland 21702 Marilyn.Menotti@gmail.com.
Andrea Coots WallaceLaboratory of Genomic Diversity, Center for Cancer Research, National Cancer Institute, Frederick, Maryland 21702.
Melody RoelkeLeidos Biomedical Research Frederick National Laboratory for Cancer Research, Frederick, Maryland 21702 Labooratory Animal Sciences Program (LASP) Bethesda Leidos Biomedical Research, Bethesda, Maryland 20892-2471.
James KehlerLaboratory of Cell and Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20814.
Robert LeightyData Management Services, Inc., National Cancer Institute-Frederick, Frederick, Maryland 21702.
Eduardo EizirikFaculdade de Biociências, Pontifícia Universidade Católica do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul 90619-900, Brazil Instituto Pró-Carnívoros, Atibaia, Sao Paulo 12945-010, Brazil.
Steven S HannahNestlé Purina PetCare, St. Louis, Missouri 63164.
George NelsonBSP-CCR Genetics Core, Frederick National Laboratory, Frederick, Maryland 21702.
Alejandro A SchäfferNational Center for Biotechnology Information, National Institutes of Health, Bethesda, Maryland 20894.
Catherine J ConnellyGarvan Institute of Medical Research, Sydney, New South Wales, Australia.
Stephen J O'BrienLaboratory of Genomic Diversity, Center for Cancer Research, National Cancer Institute, Frederick, Maryland 21702 Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russia.
David K RyugoDepartment of Otolaryngology, Head and Neck Surgery, Center for Hearing Sciences, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205 Garvan Institute of Medical Research, Sydney, New South Wales, Australia.

Funding

SINGLE-CELL MARKING STUDIES OF THE AUDITORY NERVER01DC000232 · NIDCD · JOHNS HOPKINS UNIVERSITY · PI RYUGO, DAVID K. · 1989 to 2010
$6.4M
Intramural NIH HHSNIDCD NIH HHS DC00232NIDCD NIH HHS R01 DC000232PHS HHS HHSN26120080001E
6 · The paper itself

Abstract

The Dominant White locus (W) in the domestic cat demonstrates pleiotropic effects exhibiting complete penetrance for absence of coat pigmentation and incomplete penetrance for deafness and iris hypopigmentation. We performed linkage analysis using a pedigree segregating White to identify KIT (Chr. B1) as the feline W locus. Segregation and sequence analysis of the KIT gene in two pedigrees (P1 and P2) revealed the remarkable retrotransposition and evolution of a feline endogenous retrovirus (FERV1) as responsible for two distinct phenotypes of the W locus, Dominant White, and white spotting. A full-length (7125 bp) FERV1 element is associated with white spotting, whereas a FERV1 long terminal repeat (LTR) is associated with all Dominant White individuals. For purposes of statistical analysis, the alternatives of wild-type sequence, FERV1 element, and LTR-only define a triallelic marker. Taking into account pedigree relationships, deafness is genetically linked and associated with this marker; estimated P values for association are in the range of 0.007 to 0.10. The retrotransposition interrupts a DNAase I hypersensitive site in KIT intron 1 that is highly conserved across mammals and was previously demonstrated to regulate temporal and tissue-specific expression of KIT in murine hematopoietic and melanocytic cells. A large-population genetic survey of cats (n = 270), representing 30 cat breeds, supports our findings and demonstrates statistical significance of the FERV1 LTR and full-length element with Dominant White/blue iris (P < 0.0001) and white spotting (P < 0.0001), respectively.

Indexed as

AnimalsBreedingCatsEndogenous RetrovirusesGenetic LinkageGenetics, PopulationGenotypeHearing LossHematopoietic Stem CellsIntronsMast CellsPedigreePhenotypePigmentationProto-Oncogene Proteins c-kitRetroelementsProto-Oncogene Proteins c-kitRetroelementsdeafdomestic catFERV1retrotranspositionWhitewhite spotting

Identifiers

PMID25085922
PMCPMC4199695

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.