Evidence map›Paper›PMID 25084532›Full record

ArticlePloS one2014

Host adaptation of Chlamydia pecorum towards low virulence evident in co-evolution of the ompA, incA, and ORF663 Loci.

Khalil Yousef Mohamad, Bernhard Kaltenboeck, Kh Shamsur Rahman, Simone Magnino, Konrad Sachse, Annie Rodolakis

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Dominance of Vaccine-SpecificEcology and evolution · 2025
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  5. Genetic diversity of Chlamydia pecorum detected in sheep flocks from Mexico.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 4 countries.

Khalil Yousef MohamadINRA, UR1282 Infectiologie Animale et Santé Publique, Nouzilly, France.
Bernhard KaltenboeckDepartment of Pathobiology, College of Veterinary Medicine, Auburn University, Auburn, Alabama, United States of America.
Kh Shamsur RahmanDepartment of Pathobiology, College of Veterinary Medicine, Auburn University, Auburn, Alabama, United States of America.
Simone MagninoIstituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna "Bruno Ubertini", National Reference Laboratory for Animal Chlamydioses, Sezione Diagnostica di Pavia, Pavia, Italy.
Konrad SachseFriedrich-Loeffler-Institut Jena, OIE and National Reference Laboratory for Chlamydiosis, Jena, Germany.
Annie RodolakisINRA, UR1282 Infectiologie Animale et Santé Publique, Nouzilly, France.
Auburn University · USInfectiologie Animale et Santé Publique · FRFriedrich-Loeffler-Institut · DEIstituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna "Bruno Ubertini" · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chlamydia (C.) pecorum, an obligate intracellular bacterium, may cause severe diseases in ruminants, swine and koalas, although asymptomatic infections are the norm. Recently, we identified genetic polymorphisms in the ompA, incA and ORF663 genes that potentially differentiate between high-virulence C. pecorum isolates from diseased animals and low-virulence isolates from asymptomatic animals. Here, we expand these findings by including additional ruminant, swine, and koala strains. Coding tandem repeats (CTRs) at the incA locus encoded a variable number of repeats of APA or AGA amino acid motifs. Addition of any non-APA/AGA repeat motif, such as APEVPA, APAVPA, APE, or APAPE, associated with low virulence (P<10-4), as did a high number of amino acids in all incA CTRs (P = 0.0028). In ORF663, high numbers of 15-mer CTRs correlated with low virulence (P = 0.0001). Correction for ompA phylogram position in ORF663 and incA abolished the correlation between genetic changes and virulence, demonstrating co-evolution of ompA, incA, and ORF663 towards low virulence. Pairwise divergence of ompA, incA, and ORF663 among isolates from healthy animals was significantly higher than among strains isolated from diseased animals (P≤10-5), confirming the longer evolutionary path traversed by low-virulence strains. All three markers combined identified 43 unique strains and 4 pairs of identical strains among all 57 isolates tested, demonstrating the suitability of these markers for epidemiological investigations.

Indexed as

AnimalsBacterial Outer Membrane ProteinsBacterial ProteinsBiological EvolutionChlamydiaChlamydia InfectionsPhascolarctidaePhosphoproteinsPolymerase Chain ReactionSwineTandem Repeat SequencesVirulenceBacterial Outer Membrane ProteinsBacterial ProteinsIncA protein, bacteriaOMPA outer membrane proteinsPhosphoproteins

Identifiers

PMID25084532
PMCPMC4118914
OpenAlexW2065877720

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.