Evidence map›Paper›PMID 25084529›Full record

ArticlePloS one2014

Decreased DGCR8 expression and miRNA dysregulation in individuals with 22q11.2 deletion syndrome.

Chantal Sellier, Vicki J Hwang, Ravi Dandekar, Blythe Durbin-Johnson, Nicolas Charlet-Berguerand, Bradley P Ander, Frank R Sharp, Kathleen Angkustsiri, Tony J Simon, Flora Tassone

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 1 pooled it
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 1 synthesis or guideline pooled it, 84 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Chantal SellierInstitute of Genetics and Molecular and Cellular Biology, University of Strasbourg, Strasbourg, France.
Vicki J HwangDepartment of Biochemistry and Molecular Medicine, University of California Davis, Sacramento, California, United States of America.
Ravi DandekarDepartment of Biochemistry and Molecular Medicine, University of California Davis, Sacramento, California, United States of America.
Blythe Durbin-JohnsonDepartment of Public Health Sciences, UC Davis Medical Center, Sacramento, California, United States of America.
Nicolas Charlet-BerguerandInstitute of Genetics and Molecular and Cellular Biology, University of Strasbourg, Strasbourg, France.
Bradley P AnderMIND Institute, UC Davis Medical Center, Sacramento, California, United States of America; Department of Neurology, UC Davis Medical Center, Sacramento, California, United States of America.
Frank R SharpMIND Institute, UC Davis Medical Center, Sacramento, California, United States of America; Department of Neurology, UC Davis Medical Center, Sacramento, California, United States of America.
Kathleen AngkustsiriMIND Institute, UC Davis Medical Center, Sacramento, California, United States of America; Department of Pediatrics, UC Davis Medical Center, Sacramento, California, United States of America.
Tony J SimonMIND Institute, UC Davis Medical Center, Sacramento, California, United States of America; Department of Psychiatry, UC Davis Medical Center, Sacramento, California, United States of America.
Flora TassoneDepartment of Biochemistry and Molecular Medicine, University of California Davis, Sacramento, California, United States of America; MIND Institute, UC Davis Medical Center, Sacramento, California, United States of America.
University of California Davis Medical Center · USUniversity of California, Davis · USInstitut de génétique et de biologie moléculaire et cellulaire · FRUniversité de Strasbourg · FR

Funding

UC Davis Clinical and Translational Science CenterUL1TR000002 · NCATS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BERGLUND, LARS F · 2012 to 2015
$12.2M
Visuospatial Cognitive Deficit in Del22q11.2 SyndromeR01HD042974 · NICHD · UNIVERSITY OF CALIFORNIA DAVIS · PI SIMON, TONY J · 2003 to 2013
$4.9M
NCATS NIH HHS UL1 TR000002NCATS NIH HHS UL1TR000002NICHD NIH HHS R01 HD042974NICHD NIH HHS R01HD042974
6 · The paper itself

Abstract

Deletion of the 1.5-3 Mb region of chromosome 22 at locus 11.2 gives rise to the chromosome 22q11.2 deletion syndrome (22q11DS), also known as DiGeorge and Velocardiofacial Syndromes. It is the most common micro-deletion disorder in humans and one of the most common multiple malformation syndromes. The syndrome is characterized by a broad phenotype, whose characterization has expanded considerably within the last decade and includes many associated findings such as craniofacial anomalies (40%), conotruncal defects of the heart (CHD; 70-80%), hypocalcemia (20-60%), and a range of neurocognitive anomalies with high risk of schizophrenia, all with a broad phenotypic variability. These phenotypic features are believed to be the result of a change in the copy number or dosage of the genes located in the deleted region. Despite this relatively clear genetic etiology, very little is known about which genes modulate phenotypic variations in humans or if they are due to combinatorial effects of reduced dosage of multiple genes acting in concert. Here, we report on decreased expression levels of genes within the deletion region of chromosome 22, including DGCR8, in peripheral leukocytes derived from individuals with 22q11DS compared to healthy controls. Furthermore, we found dysregulated miRNA expression in individuals with 22q11DS, including miR-150, miR-194 and miR-185. We postulate this to be related to DGCR8 haploinsufficiency as DGCR8 regulates miRNA biogenesis. Importantly we demonstrate that the level of some miRNAs correlates with brain measures, CHD and thyroid abnormalities, suggesting that the dysregulated miRNAs may contribute to these phenotypes and/or represent relevant blood biomarkers of the disease in individuals with 22q11DS.

Indexed as

AdolescentChildChromosome DeletionChromosomes, Human, Pair 22DiGeorge SyndromeFemaleHumansMaleMicroRNAsRNA-Binding ProteinsDGCR8 protein, humanMicroRNAsRNA-Binding Proteins

Identifiers

PMID25084529
PMCPMC4118991
OpenAlexW1990044417

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.