Evidence map›Paper›PMID 25084337›Full record

ArticleActa crystallographica. Section D, Biological crystallography2014

Schistosoma mansoni venom allergen-like protein 4 (SmVAL4) is a novel lipid-binding SCP/TAPS protein that lacks the prototypical CAP motifs.

Alan Kelleher, Rabih Darwiche, Wanderson C Rezende, Leonardo P Farias, Luciana C C Leite, Roger Schneiter, Oluwatoyin A Asojo

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Acta crystallographica. Section D, Biological crystallography, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. The Proteome and Lipidome of Extracellular Vesicles fromInternational journal of molecular sciences · 2023
    Article
  3. Article
  4. Article
  5. Article
  6. Frontiers in chemistry · 2020
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Plant pathogenesis-related proteins of the cacao fungal pathogenThe Journal of biological chemistry · 2017
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Alan KelleherNational School of Tropical Medicine, Baylor College of Medicine, Houston, TX 77030, USA.
Rabih DarwicheDivision of Biochemistry, Department of Biology, University of Fribourg, Chemin du Musée 10, CH 1700 Fribourg, Switzerland.
Wanderson C RezendeNational School of Tropical Medicine, Baylor College of Medicine, Houston, TX 77030, USA.
Leonardo P FariasCentro de Biotecnologia, Instituto Butantan, São Paulo, SP, Brazil.
Luciana C C LeiteCentro de Biotecnologia, Instituto Butantan, São Paulo, SP, Brazil.
Roger SchneiterDivision of Biochemistry, Department of Biology, University of Fribourg, Chemin du Musée 10, CH 1700 Fribourg, Switzerland.
Oluwatoyin A AsojoNational School of Tropical Medicine, Baylor College of Medicine, Houston, TX 77030, USA.
Baylor College of Medicine · USInstituto Butantan · BRUniversity of Fribourg · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Schistosomiasis is a parasitic disease that affects over 200 million people. Vaccine candidates have been identified, including Schistosoma mansoni venom allergen-like proteins (SmVALs) from the SCP/TAPS (sperm-coating protein/Tpx/antigen 5/pathogenesis related-1/Sc7) superfamily. The first SmVAL structure, SmVAL4, was refined to a resolution limit of 2.16 Å. SmVAL4 has a unique structure that could not be predicted from homologous structures, with longer loops and an unusual C-terminal extension. SmVAL4 has the characteristic α/β-sandwich and central SCP/TAPS cavity. Furthermore, SmVAL4 has only one of the signature CAP cavity tetrad amino-acid residues and is missing the histidines that coordinate divalent cations such as Zn(2+) in other SCP/TAPS proteins. SmVAL4 has a cavity between α-helices 1 and 4 that was observed to bind lipids in tablysin-15, suggesting the ability to bind lipids. Subsequently, SmVAL4 was shown to bind cholesterol in vitro. Additionally, SmVAL4 was shown to complement the in vivo sterol-export phenotype of yeast mutants lacking their endogenous CAP proteins. Expression of SmVAL4 in yeast cells lacking endogenous CAP function restores the block in sterol export. These studies suggest an evolutionarily conserved lipid-binding function shared by CAP proteins such as SmVAL4 and yeast CAP proteins such as Pry1.

Indexed as

AllergensAmino Acid MotifsAmino Acid SequenceAnimalsChromatography, LiquidCrystallography, X-RayLipidsMolecular Sequence DataProtein BindingProtein ConformationSchistosoma mansoniSequence Homology, Amino AcidVenomsAllergensLipidsVenomsAncylostoma secreted proteinCAPSaccharomyces cerevisiaeSchistosoma mansonisperm-coating proteinsterol bindingTAPsvenom allergen-like proteinvenom antigen 5

Identifiers

PMID25084337
PMCPMC4118828
OpenAlexW2118239233

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.