Evidence map›Paper›PMID 25081482›Full record

ArticleScience (New York, N.Y.)2014

Poly-dipeptides encoded by the C9orf72 repeats bind nucleoli, impede RNA biogenesis, and kill cells.

Ilmin Kwon, Siheng Xiang, Masato Kato, Leeju Wu, Pano Theodoropoulos, Tao Wang, Jiwoong Kim, Jonghyun Yun, Yang Xie, Steven L McKnight

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 416 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
416citing papers in PubMed, 1 pooled it
26.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

416 citing papers in PubMed, 1 synthesis or guideline pooled it, 675 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
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  7. RAN Translation-Coupled Decay of theInternational journal of molecular sciences · 2026
    Article
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  18. Quality control and signaling pathways at stalled ribosomes.Experimental & molecular medicine · 2026
    Review
  19. Article
  20. Fibrillarin: bridging ribosome biogenesis and apoptosis in cellular stress and disease.Apoptosis : an international journal on programmed cell death · 2026
    Review

356 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Ilmin KwonDepartment of Biochemistry, UT Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390-9152, USA.
Siheng XiangDepartment of Biochemistry, UT Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390-9152, USA.
Masato KatoDepartment of Biochemistry, UT Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390-9152, USA.
Leeju WuDepartment of Biochemistry, UT Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390-9152, USA.
Pano TheodoropoulosDepartment of Biochemistry, UT Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390-9152, USA.
Tao WangQuantitative Biomedical Research Center, Department of Clinical Sciences, UT Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390-9152, USA.
Jiwoong KimQuantitative Biomedical Research Center, Department of Clinical Sciences, UT Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390-9152, USA.
Jonghyun YunQuantitative Biomedical Research Center, Department of Clinical Sciences, UT Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390-9152, USA.
Yang XieQuantitative Biomedical Research Center, Department of Clinical Sciences, UT Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390-9152, USA.
Steven L McKnightDepartment of Biochemistry, UT Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390-9152, USA. steven.mcknight@utsouthwestern.edu.
The University of Texas Southwestern Medical Center · USSouthwestern Medical Center · USSouthwestern Medical Center

Funding

Reversible Polymerization of Low Complexity Polypeptide Sequences as a FrameworkU01GM107623 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI MCKNIGHT, STEVEN L · 2014 to 2017
$2.0M
NIGMS NIH HHS U01 GM107623
6 · The paper itself

Abstract

Many RNA regulatory proteins controlling pre-messenger RNA splicing contain serine:arginine (SR) repeats. Here, we found that these SR domains bound hydrogel droplets composed of fibrous polymers of the low-complexity domain of heterogeneous ribonucleoprotein A2 (hnRNPA2). Hydrogel binding was reversed upon phosphorylation of the SR domain by CDC2-like kinases 1 and 2 (CLK1/2). Mutated variants of the SR domains changing serine to glycine (SR-to-GR variants) also bound to hnRNPA2 hydrogels but were not affected by CLK1/2. When expressed in mammalian cells, these variants bound nucleoli. The translation products of the sense and antisense transcripts of the expansion repeats associated with the C9orf72 gene altered in neurodegenerative disease encode GRn and PRn repeat polypeptides. Both peptides bound to hnRNPA2 hydrogels independent of CLK1/2 activity. When applied to cultured cells, both peptides entered cells, migrated to the nucleus, bound nucleoli, and poisoned RNA biogenesis, which caused cell death.

Indexed as

Alternative SplicingAmyotrophic Lateral SclerosisAstrocytesC9orf72 ProteinCell DeathCell NucleolusCells, CulturedDipeptidesExcitatory Amino Acid Transporter 2Frontotemporal DementiaGlutamate Plasma Membrane Transport ProteinsHeterogeneous-Nuclear Ribonucleoprotein Group A-BHumansHydrogel, Polyethylene Glycol DimethacrylatePhosphorylationProtein BiosynthesisC9orf72 ProteinC9orf72 protein, humanClk dual-specificity kinasesDipeptidesExcitatory Amino Acid Transporter 2Glutamate Plasma Membrane Transport ProteinsHeterogeneous-Nuclear Ribonucleoprotein Group A-BhnRNP A2Hydrogel, Polyethylene Glycol DimethacrylateProteinsProtein Serine-Threonine KinasesProtein-Tyrosine KinasesRNA, AntisenseRNA, MessengerRNA, RibosomalSLC1A2 protein, human

Identifiers

PMID25081482
PMCPMC4459787
OpenAlexW2073190029

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.