Evidence map›Paper›PMID 25080366›Full record

ArticleJournal of molecular evolution2014

Exchange and complementation of genes coding for photosynthetic reaction center core subunits among purple bacteria.

Kenji V P Nagashima, André Verméglio, Naoki Fusada, Sakiko Nagashima, Keizo Shimada, Kazuhito Inoue

Abstract read
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In one paragraph

Article in Journal of molecular evolution, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Complete genome sequence of "Standards in genomic sciences · 2018
    Article
  2. Probing structure-function relationships in early events in photosynthesis using a chimeric photocomplex.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Kenji V P NagashimaResearch Institute for Photobiological Hydrogen Production, Kanagawa University, 2946 Tsuchiya, Hiratsuka, 259-1293, Kanagawa, Japan, wt503649bw@kanagawa-u.ac.jp.
André Verméglio
Naoki Fusada
Sakiko Nagashima
Keizo Shimada
Kazuhito Inoue
Kanagawa University · JPTokyo Metropolitan University · JPCEA Cadarache · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A mutant of the phototrophic species belonging to the β-proteobacteria, Rubrivivax gelatinosus, lacking the photosynthetic growth ability was constructed by the removal of genes coding for the L, M, and cytochrome subunits of the photosynthetic reaction center complex. The L, M, and cytochrome genes derived from five other species of proteobacteria, Acidiphilium rubrum, Allochromatium vinosum, Blastochloris viridis, Pheospirillum molischianum, and Roseateles depolymerans, and the L and M subunits from two other species, Rhodobacter sphaeroides and Rhodopseudomonas palustris, respectively, have been introduced into this mutant. Introduction of the genes from three of these seven species, Rte. depolymerans, Ach. vinosum, and Psp. molischianum, restored the photosynthetic growth ability of the mutant of Rvi. gelatinosus, although the growth rates were 1.5, 9.4, and 10.7 times slower, respectively, than that of the parent strain. Flash-induced kinetic measurements for the intact cells of these three mutants showed that the photo-oxidized cytochrome c bound to the introduced reaction center complex could be rereduced by electron donor proteins of Rvi. gelatinosus with a t1/2 of less than 10 ms. The reaction center core subunits of photosynthetic proteobacteria appear to be exchangeable if the sequence identities of the LM core subunits between donor and acceptor species are high enough, i.e., 70% or more.

Indexed as

Bacterial ProteinsDNA, BacterialGenetic Complementation TestGene Transfer, HorizontalMutationPhotosynthesisPhotosynthetic Reaction Center Complex ProteinsPhylogenyProteobacteriaBacterial ProteinsDNA, BacterialPhotosynthetic Reaction Center Complex Proteins

Identifiers

PMID25080366
OpenAlexW2008884207

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.