Evidence map›Paper›PMID 25079139›Full record

ArticleBMC genetics2014

Genetic linkage map construction and QTL identification of juvenile growth traits in Torreya grandis.

Yanru Zeng, Shengyue Ye, Weiwu Yu, Song Wu, Wei Hou, Rongling Wu, Wensheng Dai, Jun Chang

Open access · diamondAbstract read
In one paragraph

Article in BMC genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Pyrolysis molecule ofSaudi journal of biological sciences · 2019
    Article
  5. Article
  6. Constructing a linkage-linkage disequilibrium map using dominant-segregating markers.DNA research : an international journal for rapid publication of reports on genes and genomes · 2016
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Yanru Zeng
Shengyue Ye
Weiwu Yu
Song Wu
Wei Hou
Rongling Wu
Wensheng Dai
Jun Chang
Zhejiang A & F University · CNChinese Academy of Forestry · CNPennsylvania State University · USState University of New York · USStony Brook University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Torreya grandis Fort. ex Lindl, a conifer species widely distributed in Southeastern China, is of high economic value by producing edible, nutrient seeds. However, knowledge about the genome structure and organization of this species is poorly understood, thereby limiting the effective use of its gene resources. Here, we report on a first genetic linkage map for Torreya grandis using 96 progeny randomly chosen from a half-sib family of a commercially cultivated variety of this species, Torreya grandis Fort. ex Lindl cv. Merrillii. The map contains 262 molecular markers, i.e., 75 random amplified polymorphic DNAs (RAPD), 119 inter-simple sequence repeats (ISSR) and 62 amplified fragments length polymorphisms (AFLP), and spans a total of 7,139.9 cM, separated by 10 linkage groups. The linkage map was used to map quantitative trait loci (QTLs) associated with juvenile growth traits by functional mapping. We identified four basal diameter-related QTLs on linkage groups 1, 5 and 9; four height-related QTLs on linkage groups 1, 2, 5 and 8. It was observed that the genetic effects of QTLs on growth traits vary with age, suggesting the dynamic behavior of growth QTLs. Part of the QTLs was found to display a pleiotropic effect on basal diameter growth and height growth.

Indexed as

Chromosome MappingGenetic LinkageQuantitative Trait LociAmplified Fragment Length Polymorphism AnalysisChinaDNA, PlantMicrosatellite RepeatsRandom Amplified Polymorphic DNA TechniqueTaxaceaeDNA, Plant

Identifiers

PMID25079139
PMCPMC4118616
OpenAlexW2075239279

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.