Evidence map›Paper›PMID 25078689›Full record

ArticleJournal of virology2014

AUF1 p45 promotes West Nile virus replication by an RNA chaperone activity that supports cyclization of the viral genome.

Susann Friedrich, Tobias Schmidt, René Geissler, Hauke Lilie, Stefan Chabierski, Sebastian Ulbert, Uwe G Liebert, Ralph P Golbik, Sven-Erik Behrens

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 50 citations in OpenAlex.

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  7. Protein arginine methylation in viral infection and antiviral immunity.International journal of biological sciences · 2023
    Review
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  19. Universal RNAFrontiers in microbiology · 2020
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Susann FriedrichInstitute of Biochemistry and Biotechnology (NFI), Martin Luther University Halle-Wittenberg, Halle, Germany.
Tobias SchmidtInstitute of Biochemistry and Biotechnology (NFI), Martin Luther University Halle-Wittenberg, Halle, Germany.
René GeisslerInstitute of Biochemistry and Biotechnology (NFI), Martin Luther University Halle-Wittenberg, Halle, Germany.
Hauke LilieInstitute of Biochemistry and Biotechnology (NFI), Martin Luther University Halle-Wittenberg, Halle, Germany.
Stefan ChabierskiVaccine Technologies Unit, Fraunhofer Institute for Cell Therapy and Immunology, Leipzig, Germany.
Sebastian UlbertVaccine Technologies Unit, Fraunhofer Institute for Cell Therapy and Immunology, Leipzig, Germany.
Uwe G LiebertInstitute of Virology, Leipzig University, Leipzig, Germany.
Ralph P GolbikInstitute of Biochemistry and Biotechnology (NFI), Martin Luther University Halle-Wittenberg, Halle, Germany.
Sven-Erik BehrensInstitute of Biochemistry and Biotechnology (NFI), Martin Luther University Halle-Wittenberg, Halle, Germany sven.behrens@biochemtech.uni-halle.de.
Martin Luther University Halle-Wittenberg · DEFraunhofer Institute for Cell Therapy and Immunology · DELeipzig University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

unlabelledA central aspect of current virology is to define the function of cellular proteins (host factors) that support the viral multiplication process. This study aimed at characterizing cellular proteins that assist the RNA replication process of the prevalent human pathogen West Nile virus (WNV). Using in vitro and cell-based approaches, we defined the p45 isoform of AU-rich element RNA-binding protein 1 (AUF1) as a host factor that enables efficient WNV replication. It was demonstrated that AUF1 p45 has an RNA chaperone activity, which aids the structural rearrangement and cyclization of the WNV RNA that is required by the viral replicase to initiate RNA replication. The obtained data suggest the RNA chaperone activity of AUF1 p45 is an important determinant of the WNV life cycle. IMPORTANCE: In this study, we identified a cellular protein, AUF1 (also known as heterogeneous ribonucleoprotein D [hnRNPD]), acting as a helper (host factor) of the multiplication process of the important human pathogen West Nile virus. Several different variants of AUF1 exist in the cell, and one variant, AUF1 p45, was shown to support viral replication most significantly. Interestingly, we obtained a set of experimental data indicating that a main function of AUF1 p45 is to modify and thus prepare the West Nile virus genome in such a way that the viral enzyme that generates progeny genomes is empowered to do this considerably more efficiently than in the absence of the host factor. The capability of AUF1 p45 to rearrange the West Nile virus genome was thus identified to be an important aspect of a West Nile virus infection.

Indexed as

Gene Expression Regulation, ViralGenome, ViralBinding SitesCell Line, TumorHepatocytesHeterogeneous-Nuclear Ribonucleoprotein DHeterogeneous Nuclear Ribonucleoprotein D0Host-Pathogen InteractionsHumansMolecular ChaperonesProtein BindingProtein IsoformsRNARNA, CircularRNA, ViralVirus ReplicationHeterogeneous-Nuclear Ribonucleoprotein DHeterogeneous Nuclear Ribonucleoprotein D0HNRNPD protein, humanMolecular ChaperonesProtein IsoformsRNARNA, CircularRNA, Viral

Identifiers

PMID25078689
PMCPMC4178777
OpenAlexW2056348682

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.