Evidence map›Paper›PMID 25078331›Full record

ArticleJournal of clinical pathology2014

Next-generation sequencing of adrenocortical carcinoma reveals new routes to targeted therapies.

J S Ross, K Wang, J V Rand, L Gay, M J Presta, C E Sheehan, S M Ali, J A Elvin, E Labrecque, C Hiemstra and 8 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of clinical pathology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 62 citations in OpenAlex.

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  12. Journal for immunotherapy of cancer · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 2 institutions in 1 country.

J S RossDepartment of Pathology and Laboratory Medicine, Albany Medical College, Albany, New York, USA Foundation Medicine, Inc., Cambridge, Massachusetts, USA.
K WangFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
J V RandDepartment of Pathology and Laboratory Medicine, Albany Medical College, Albany, New York, USA.
L GayFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
M J PrestaDepartment of Pathology and Laboratory Medicine, Albany Medical College, Albany, New York, USA.
C E SheehanDepartment of Pathology and Laboratory Medicine, Albany Medical College, Albany, New York, USA.
S M AliFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
J A ElvinFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
E LabrecqueFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
C HiemstraFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
J BuellFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
G A OttoFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
R YelenskyFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
D LipsonFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
D MorosiniFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
J ChmieleckiFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
V A MillerFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
P J StephensFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
Foundation Medicine (United States)Albany Medical Center Hospital · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimsAdrenocortical carcinoma (ACC) carries a poor prognosis and current systemic cytotoxic therapies result in only modest improvement in overall survival. In this retrospective study, we performed a comprehensive genomic profiling of 29 consecutive ACC samples to identify potential targets of therapy not currently searched for in routine clinical practice.

methodsDNA from 29 ACC was sequenced to high, uniform coverage (Illumina HiSeq) and analysed for genomic alterations (GAs).

resultsAt least one GA was found in 22 (76%) ACC (mean 2.6 alterations per ACC). The most frequent GAs were in TP53 (34%), NF1 (14%), CDKN2A (14%), MEN1 (14%), CTNNB1 (10%) and ATM (10%). APC, CCND2, CDK4, DAXX, DNMT3A, KDM5C, LRP1B, MSH2 and RB1 were each altered in two cases (7%) and EGFR, ERBB4, KRAS, MDM2, NRAS, PDGFRB, PIK3CA, PTEN and PTCH1 were each altered in a single case (3%). In 17 (59%) of ACC, at least one GA was associated with an available therapeutic or a mechanism-based clinical trial.

conclusionsNext-generation sequencing can discover targets of therapy for relapsed and metastatic ACC and shows promise to improve outcomes for this aggressive form of cancer.

Indexed as

High-Throughput Nucleotide SequencingMolecular Targeted TherapyAdrenal Cortex NeoplasmsAdrenocortical CarcinomaAdultAgedAntineoplastic AgentsBiomarkers, TumorBiopsyDrug DesignFemaleGene Expression ProfilingGenetic Predisposition to DiseaseHumansMaleMiddle AgedAntineoplastic AgentsBiomarkers, TumorCancer GeneticsEndocrine PathologyGene AmplificationMolecular PathologyOncology

Identifiers

PMID25078331
PMCPMC4215283
OpenAlexW2099378312

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.