Evidence map›Paper›PMID 25077649›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2015

Identification of OSBPL2 as a novel candidate gene for progressive nonsyndromic hearing loss by whole-exome sequencing.

Guangqian Xing, Jun Yao, Bin Wu, Tingting Liu, Qinjun Wei, Cheng Liu, Yajie Lu, Zhibin Chen, Heng Zheng, Xiaonan Yang and 1 more

Open access · bronzeAbstract read
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In one paragraph

Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 64 citations in OpenAlex.

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  8. Autophagy · 2022
    Article
  9. Article
  10. Searching for the Molecular Basis of Partial Deafness.International journal of molecular sciences · 2022
    Article
  11. Article
  12. Article
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  14. The role of the Golgi apparatus in disease (Review).International journal of molecular medicine · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Guangqian XingDepartment of Otolaryngology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, P.R. China.
Jun YaoDepartment of Biotechnology, School of Basic Medical Science, Nanjing Medical University, Nanjing, P.R. China.
Bin WuBGI-Shenzhen, Guangdong, P.R. China.
Tingting LiuDepartment of Otolaryngology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, P.R. China.
Qinjun WeiDepartment of Biotechnology, School of Basic Medical Science, Nanjing Medical University, Nanjing, P.R. China.
Cheng LiuDepartment of Otolaryngology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, P.R. China.
Yajie LuDepartment of Biotechnology, School of Basic Medical Science, Nanjing Medical University, Nanjing, P.R. China.
Zhibin ChenDepartment of Otolaryngology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, P.R. China.
Heng ZhengDepartment of Bioinformatics, School of Life Science and Technology, China Pharmaceutical University, Nanjing, P.R. China.
Xiaonan YangBGI-Shenzhen, Guangdong, P.R. China.
Xin CaoDepartment of Biotechnology, School of Basic Medical Science, Nanjing Medical University, Nanjing, P.R. China.
Jiangsu Province Hospital · CNNanjing Medical University · CNBGI Group (China) · CNChina Pharmaceutical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeVarious forms of hearing loss have genetic causes, but many of the responsible genes have not yet been identified. Here, we describe a large seven-generation Chinese family with autosomal dominant nonsyndromic hearing loss that has been excluded as being caused by known deafness gene mutations associated with autosomal dominant nonsyndromic hearing loss with the aim of identifying a novel causative gene involved in deafness.

methodsWhole-exome sequencing was conducted in three affected family members, and cosegregation analysis was performed on other members of the family.

resultsWhole-exome sequencing and subsequent segregation analysis identified a heterozygous frameshift mutation (c.153_154delCT, p.Gln53Argfs*100) in the oxysterol binding protein-like 2 (OSBPL2) gene in 25 affected family members. The deletion mutation is predicted to lead to premature truncation of the OSBPL2 protein. Modeling and structure-based analysis support the theory that this gene deletion is functionally deleterious. Our finding was further confirmed by the detection of another missense mutation, a c.583C>A transversion (p.Leu195Met) in exon 7 of OSBPL2, in an additional sporadic case of deafness.

conclusionBased on this study, OSBPL2 was identified as an excellent novel candidate gene for autosomal dominant nonsyndromic hearing loss; this study is the first to implicate OSBPL2 mutations in autosomal dominant nonsyndromic hearing loss.

Indexed as

AnimalsAsian PeopleChinaCochleaDeafnessExomeFemaleFrameshift MutationGenetic Association StudiesGenetic Predisposition to DiseaseHumansMaleMiceMutation, MissenseOxysterol Binding ProteinsPedigreeOSBPL2 protein, humanOxysterol Binding ProteinsReceptors, Steroid

Identifiers

PMID25077649
OpenAlexW2023522536

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.