Evidence map›Paper›PMID 25077610›Full record

ArticleJournal of neurotrauma2014

Development of a database for translational spinal cord injury research.

Jessica L Nielson, Cristian F Guandique, Aiwen W Liu, Darlene A Burke, A Todd Lash, Rod Moseanko, Stephanie Hawbecker, Sarah C Strand, Sharon Zdunowski, Karen-Amanda Irvine and 19 more

Open access · greenAbstract read
In one paragraph

Article in Journal of neurotrauma, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  6. TargetingiScience · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 14 institutions in 2 countries.

Jessica L Nielson1 Brain and Spinal Injury Center, Department of Neurological Surgery, University of California San Francisco , San Francisco, California.
Cristian F Guandique
Aiwen W Liu
Darlene A Burke
A Todd Lash
Rod Moseanko
Stephanie Hawbecker
Sarah C Strand
Sharon Zdunowski
Karen-Amanda Irvine
John H Brock
Yvette S Nout-Lomas
John C Gensel
Kim D Anderson
Mark R Segal
Ephron S Rosenzweig
David S K Magnuson
Scott R Whittemore
Dana M McTigue
Phillip G Popovich
Alexander G Rabchevsky
Stephen W Scheff
Oswald Steward
Grégoire Courtine
V Reggie Edgerton
Mark H Tuszynski
Michael S Beattie
Jacqueline C Bresnahan
Adam R Ferguson
University of California, San Francisco · USUniversity of California, Davis · USUniversity of Kentucky · USUniversity of Louisville · USThe Ohio State University · USUniversity of California, Los Angeles · USUniversity of California San Diego · USColorado State University · USÉcole Polytechnique Fédérale de Lausanne · CHOffice of International Affairs · USSan Francisco VA Medical Center · USUnited States Department of Veterans Affairs · USUniversity of California, Irvine · USUniversity of Miami · US

Funding

Signaling pathways in neuronal susceptibility to hypoxiaP20RR015576 · NCRR · UNIVERSITY OF LOUISVILLE · PI WHITTEMORE, SCOTT R · 2000 to 2009
$18.5M
Plasticity and Regeneration in the Primate Spinal CordR01NS042291 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BRESNAHAN, JACQUELINE C, CAPITANIO, JOHN P · 2001 to 2015
$13.0M
Ohio State Neuroscience Centr CoreP30NS045758 · NINDS · OHIO STATE UNIVERSITY · PI ZHU, MICHAEL X · 2004 to 2015
$7.7M
Mechanisms of secondary injury after SCIR01NS038079 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BEATTIE, MICHAEL S, BRESNAHAN, JACQUELINE C · 1999 to 2015
$5.8M
Vascular responses as therapeutic targets after SCIR01NS045734 · NINDS · UNIVERSITY OF LOUISVILLE · PI HAGG, THEO, WHITTEMORE, SCOTT R · 2004 to 2015
$5.0M
Mechanisms of plasticity and repair after SCIP30GM103507 · NIGMS · UNIVERSITY OF LOUISVILLE · PI WHITTEMORE, SCOTT R · 2012 to 2015
$4.2M
Recovery of sacral spinal reflexes after transplantationR01NS031193 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BEATTIE, MICHAEL S · 1994 to 2006
$2.3M
ER stress and oligodendrocyte survival after spinal cord injuryR01NS073584 · NINDS · UNIVERSITY OF LOUISVILLE · PI HETMAN, MICHAL, WHITTEMORE, SCOTT R · 2011 to 2015
$2.1M
Functional consequences of silencing propriospinal pathways after SCI in the adult ratR01NS089324 · NINDS · UNIVERSITY OF LOUISVILLE · PI MAGNUSON, DAVID SK, WHITTEMORE, SCOTT R · 2015 to 2019
$2.0M
Towards a therapy to regenerate corticospinal axonsR01NS073857 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI STEWARD, OSWALD · 2011 to 2015
$1.7M
Oligodendrocyte Genesis after Spinal Cord InjuryR01NS059776 · NINDS · OHIO STATE UNIVERSITY · PI MCTIGUE, DANA M · 2009 to 2013
$1.7M
Bioinformatics For Translational Spinal Cord Injury ResearchR01NS067092 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERGUSON, ADAM R · 2010 to 2014
$1.6M
NCRR NIH HHS P01 RR15576NIA NIH HHS R21 AG032518NIGMS NIH HHS P30 GM103507NINDS NIH HHS F32 NS079030NINDS NIH HHS F32NS079030NINDS NIH HHS N01-NS-3-2353NINDS NIH HHS N01-NS-3-2354NINDS NIH HHS P01NS010165NINDS NIH HHS P30 NS045758NINDS NIH HHS P30-NS045758NINDS NIH HHS R01NS031193NINDS NIH HHS R01NS032000NINDS NIH HHS R01 NS038079NINDS NIH HHS R01NS038079NINDS NIH HHS R01 NS042291NINDS NIH HHS R01NS042291NINDS NIH HHS R01 NS045734NINDS NIH HHS R01 NS052292NINDS NIH HHS R01 NS059776NINDS NIH HHS R01 NS067092NINDS NIH HHS R01NS067092NINDS NIH HHS R01 NS073584NINDS NIH HHS R01 NS073857NINDS NIH HHS R01 NS089324
6 · The paper itself

Abstract

Efforts to understand spinal cord injury (SCI) and other complex neurotrauma disorders at the pre-clinical level have shown progress in recent years. However, successful translation of basic research into clinical practice has been slow, partly because of the large, heterogeneous data sets involved. In this sense, translational neurological research represents a "big data" problem. In an effort to expedite translation of pre-clinical knowledge into standards of patient care for SCI, we describe the development of a novel database for translational neurotrauma research known as Visualized Syndromic Information and Outcomes for Neurotrauma-SCI (VISION-SCI). We present demographics, descriptive statistics, and translational syndromic outcomes derived from our ongoing efforts to build a multi-center, multi-species pre-clinical database for SCI models. We leveraged archived surgical records, postoperative care logs, behavioral outcome measures, and histopathology from approximately 3000 mice, rats, and monkeys from pre-clinical SCI studies published between 1993 and 2013. The majority of animals in the database have measures collected for health monitoring, such as weight loss/gain, heart rate, blood pressure, postoperative monitoring of bladder function and drug/fluid administration, behavioral outcome measures of locomotion, and tissue sparing postmortem. Attempts to align these variables with currently accepted common data elements highlighted the need for more translational outcomes to be identified as clinical endpoints for therapeutic testing. Last, we use syndromic analysis to identify conserved biological mechanisms of recovery after cervical SCI between rats and monkeys that will allow for more-efficient testing of therapeutics that will need to be translated toward future clinical trials.

Indexed as

Databases, FactualTranslational Research, BiomedicalAnimalsComputational BiologyHaplorhiniMiceModels, AnimalRatsSpinal Cord Injuriesbioinformaticsmonkeysrodentssyndromicstranslation

Identifiers

PMID25077610
PMCPMC4186058
OpenAlexW1972303806

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.