Evidence map›Paper›PMID 25077177›Full record

ArticleMolecular genetics & genomic medicine2014

Haploinsufficiency of insulin gene enhancer protein 1 (ISL1) is associated with d-transposition of the great arteries.

Kazutoyo Osoegawa, Kathleen Schultz, Kenneth Yun, Nebil Mohammed, Gary M Shaw, Edward J Lammer

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Genetic Variants ofBiomolecules · 2023
    Article
  6. Review
  7. Spotlight on Isl1: A Key Player in Cardiovascular Development and Diseases.Frontiers in cell and developmental biology · 2021
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Kazutoyo OsoegawaCenter for Genetics, Children's Hospital Oakland Research Institute, Children's Hospital Research Center Oakland Oakland, 94609, California ; Department of Pathology, Stanford University School of Medicine Palo Alto, California.
Kathleen SchultzCenter for Genetics, Children's Hospital Oakland Research Institute, Children's Hospital Research Center Oakland Oakland, 94609, California.
Kenneth YunCenter for Genetics, Children's Hospital Oakland Research Institute, Children's Hospital Research Center Oakland Oakland, 94609, California.
Nebil MohammedCenter for Genetics, Children's Hospital Oakland Research Institute, Children's Hospital Research Center Oakland Oakland, 94609, California.
Gary M ShawDepartment of Pediatrics, Stanford University School of Medicine Stanford, California.
Edward J LammerCenter for Genetics, Children's Hospital Oakland Research Institute, Children's Hospital Research Center Oakland Oakland, 94609, California.
Stanford University · US

Funding

Chromosomal microdeletions causing heart defectsR01HL092330 · NHLBI · CHILDREN'S HOSPITAL & RES CTR AT OAKLAND · PI KING, JANET C · 2009 to 2014
$3.6M
Conotruncal defects: genetic and nutritional riskR01HL077708 · NHLBI · CHILDREN'S HOSPITAL & RES CTR AT OAKLAND · PI LAMMER, EDWARD JAMES · 2006 to 2010
$1.9M
Gene and Nutrient Etiologies of Human Heart DefectsR01HL085859 · NHLBI · STANFORD UNIVERSITY · PI SHAW, GARY M · 2006 to 2010
$1.7M
NHLBI NIH HHS R01 HL077708NHLBI NIH HHS R01 HL085859NHLBI NIH HHS R01 HL092330
6 · The paper itself

Abstract

Congenital heart defects are the most common malformation, and are the foremost causes of mortality in the first year of life. Among congenital heart defects, conotruncal defects represent about 20% and are severe malformations with significant morbidity. Insulin gene enhancer protein 1 (ISL1) has been considered a candidate gene for conotruncal heart defects based on its embryonic expression pattern and heart defects induced in Isl1 knockout mice. Nevertheless no mutation of ISL1 has been reported from any human subject with a heart defect. From a population base of 974,579 births during 1999-2004, we used multiplex ligation-dependent probe amplification to screen for microdeletions/duplications of ISL1 among 389 infants with tetralogy of Fallot or d-transposition of the great arteries (d-TGA). We also sequenced all exons of ISL1. We identified a novel 20-kb microdeletion encompassing the entire coding region of ISL1, but not including either flanking gene, from an infant with d-TGA. We confirmed that the deletion was caused by nonhomologous end joining mechanism. Sequencing of exons of ISL1 did not reveal any subject with a novel nonsynonymous mutation. This is the first report of an ISL1 mutation of a child with a congenital heart defect.

Indexed as

Conotruncal defectshaploinsufficiencyISL1microdeletion

Identifiers

PMID25077177
PMCPMC4113275
OpenAlexW2050539940

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.