Evidence map›Paper›PMID 25076986›Full record

ArticleGut pathogens2014

Genome sequencing of multidrug resistant novel Clostridium sp. BL8 reveals its potential for pathogenicity.

Nachiket Prakash Marathe, Sudarshan Anand Shetty, Vikram B Lanjekar, Mandar Hemant Rasane, Dilip R Ranade, Yogesh S Shouche

Open access · goldAbstract read
In one paragraph

Article in Gut pathogens, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Antibiotic resistance mechanisms of Myroides sp.Journal of Zhejiang University. Science. B · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Nachiket Prakash Marathe *Microbial Culture Collection, National Centre for Cell Science, NCCS Complex, Ganeshkhind, Pune 411 007, Maharashtra, India.
Sudarshan Anand Shetty *Microbial Culture Collection, National Centre for Cell Science, NCCS Complex, Ganeshkhind, Pune 411 007, Maharashtra, India.
Vikram B LanjekarAgharkar Research Institute, Gopal Ganesh Agarkar Road, Pune 411004, Maharashtra, India.
Mandar Hemant RasaneMicrobial Culture Collection, National Centre for Cell Science, NCCS Complex, Ganeshkhind, Pune 411 007, Maharashtra, India.
Dilip R RanadeAgharkar Research Institute, Gopal Ganesh Agarkar Road, Pune 411004, Maharashtra, India.
Yogesh S ShoucheMicrobial Culture Collection, National Centre for Cell Science, NCCS Complex, Ganeshkhind, Pune 411 007, Maharashtra, India.
National Centre for Cell Science · INAgharkar Research Institute · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe human gut microbiome is important for maintaining the health status of the host. Clostridia are key members of the human gut microbiome, carrying out several important functions in the gut environment. Hence understanding the role of different Clostridium species isolated from human gut is essential. The present study was aimed at investigating the role of novel Clostridium sp. isolate BL8 in human gut using genome sequencing as a tool.

findingsThe genome analysis of Clostridium sp. BL8 showed the presence of several adaptive features like bile resistance, presence of sensory and regulatory systems, presence of oxidative stress managing systems and presence of membrane transport systems. The genome of Clostridium sp. BL8 consists of a wide variety of virulence factors like phospholipase C (alpha toxin), hemolysin, aureolysin and exfoliative toxin A, as well as adhesion factors, proteases, Type IV secretion system and antibiotic resistance genes. In vitro antibiotic sensitivity testing showed that Clostridium sp. BL8 was resistant to 11 different tested antibiotics belonging to 6 different classes. The cell cytotoxicity assay confirmed the cytotoxic effect of Clostridium sp. BL8 cells, which killed 40% of the Vero cells after 4 hrs of incubation.

conclusionsClostridium sp. BL8 has adapted for survival in human gut environment, with presence of different adaptive features. The presence of several virulence factors and cell cytotoxic activity indicate that Clostridium sp. BL8 has a potential to cause infections in humans, however further in vivo studies are necessary to ascertain this fact.

Indexed as

Antibiotic resistanceClostridiumIon Torrent PGM™Virulence

Identifiers

PMID25076986
PMCPMC4115488
OpenAlexW2157065766

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.