Evidence map›Paper›PMID 25076205›Full record

ArticlePloS one2014

Gene expression analysis of children with acute hematogenous osteomyelitis caused by Methicillin-resistant Staphylococcus aureus: correlation with clinical severity of illness.

Claudia Gaviria-Agudelo, Kristen Carter, Naureen Tareen, Virginia Pascual, Lawson A Copley

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. The Modulation of Septic Shock: A Proteomic Approach.International journal of molecular sciences · 2024
    Article
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Claudia Gaviria-AgudeloDepartment of Pediatrics Infectious Disease, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America; Children's Medical Center, Dallas, Texas, United States of America.
Kristen CarterUniversity of Texas Southwestern Medical Center, Dallas, Texas, United States of America.
Naureen TareenChildren's Medical Center, Dallas, Texas, United States of America.
Virginia PascualBaylor Institute for Immunology Research, Dallas, Texas, United States of America; Texas Scottish Rite Hospital, Dallas, Texas, United States of America.
Lawson A CopleyChildren's Medical Center, Dallas, Texas, United States of America; Orthopaedic Surgery, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America; Texas Scottish Rite Hospital, Dallas, Texas, United States of America.
Children's Medical Center · USScottish Rite Hospital · USThe University of Texas Southwestern Medical Center · US

Funding

UT Southwestern Center for Translational Medicine (UL1/KL2/TL1)UL1TR001105 · NCATS · UT SOUTHWESTERN MEDICAL CENTER · PI TOTO, ROBERT DANIEL · 2013 to 2017
$24.5M
UT-Southwestern Clinical and Translational Alliance for Research (UT-STAR) (TL1)UL1TR000451 · NCATS · UT SOUTHWESTERN MEDICAL CENTER · PI TOTO, ROBERT DANIEL · 2012 to 2012
$6.3M
NCATS NIH HHS UL1 TR000451NCATS NIH HHS UL1TR000451NCATS NIH HHS UL1 TR001105
6 · The paper itself

Abstract

Children with acute hematogenous osteomyelitis (AHO) demonstrate a broad spectrum of clinical manifestations, ranging from mild to severe. Several advances have been achieved in the study of host immune response to acute invasive Staphylococcus aureus infections through gene expression analysis. However, previous research has neither attempted to evaluate the response of children with AHO specific to Methicillin-resistant Staphylococcus aureus (MRSA) nor to correlate gene expression with clinical phenotype. Study objective was to correlate gene expression of children with AHO due to MRSA with clinical severity of illness. Whole blood samples were obtained in Tempus tubes from 12 children with osteomyelitis once cultures obtained directly from the site of infection confirmed to be positive for MRSA. Using an Illumina platform and a systems-wide modular analysis, microarray findings from ten of these children were compared to that of nine healthy (age, ethnicity and gender) matched controls and correlated with clinical severity of illness. Children with AHO from MRSA demonstrated over-expression of innate immunity with respect to neutrophil activity, coagulation, inflammatory response, and erythrocyte development. Concurrently, these children demonstrated under-expression of adaptive immunity with respect to lymphocyte activation and activity of T-cell, cytotoxic or NK cell, and B-cell lines. Three over-expressed genes, P2RX1, SORT1, and RETN, and two under-expressed genes, LOC641788 and STAT 4, were significantly correlated with severity of illness. STAT 4 showed the strongest correlation (R2 = -0.83). STAT4 downregulation could potentially explain under-expression of genes related to adaptive immunity in this cohort of patients with AHO. This study identified specific genes which correspond to disease severity during the early hospitalization of children with AHO from MRSA. Pattern recognition of this combination of genes could help to identify in the future severe clinical phenotypes before the disease is fully manifest and direct appropriate attention and resources to those children.

Indexed as

Acute DiseaseAdaptive ImmunityAdaptor Proteins, Vesicular TransportAdolescentChildChild, PreschoolC-Reactive ProteinFemaleGene Expression RegulationHumansImmunity, InnateMaleMethicillin-Resistant Staphylococcus aureusNeutrophilsOsteomyelitisProspective StudiesAdaptor Proteins, Vesicular TransportC-Reactive ProteinReceptors, Purinergic P2X1ResistinRETN protein, humanSortilinSTAT4 Transcription Factor

Identifiers

PMID25076205
PMCPMC4116206
OpenAlexW2036149914

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.