Evidence map›Paper›PMID 25075317›Full record

ArticleIUCrJ2014

Structural insights into WcbI, a novel polysaccharide-biosynthesis enzyme.

Mirella Vivoli, Emily Ayres, Edward Beaumont, Michail N Isupov, Nicholas J Harmer

Open access · goldAbstract read
In one paragraph

Article in IUCrJ, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Mirella VivoliCollege of Life and Environmental Sciences, University of Exeter , Geoffrey Pope Building, Stocker Road, Exeter EX4 4QD, England.
Emily AyresCollege of Life and Environmental Sciences, University of Exeter , Geoffrey Pope Building, Stocker Road, Exeter EX4 4QD, England.
Edward BeaumontCollege of Life and Environmental Sciences, University of Exeter , Geoffrey Pope Building, Stocker Road, Exeter EX4 4QD, England.
Michail N IsupovCollege of Life and Environmental Sciences, University of Exeter , Geoffrey Pope Building, Stocker Road, Exeter EX4 4QD, England.
Nicholas J HarmerCollege of Life and Environmental Sciences, University of Exeter , Geoffrey Pope Building, Stocker Road, Exeter EX4 4QD, England.
University of Exeter · GB

Funding

Biotechnology and Biological Sciences Research Council BB/H019685/1
6 · The paper itself

Abstract

Capsular polysaccharides (CPSs) are protective structures on the surfaces of many Gram-negative bacteria. The principal CPS of the human pathogen and Tier 1 select agent Burkholderia pseudomallei consists of a linear repeat of --3)--2-O-acetyl-6-deoxy-β-d-manno-heptopyranose-(1-. This CPS is critical to the virulence of this emerging pathogen and represents a key target for the development of novel therapeutics. wcbI is one of several genes in the CPS biosynthetic cluster whose deletion leads to significant attenuation of the pathogen; unlike most others, it has no homologues of known function and no detectable sequence similarity to any protein with an extant structure. Here, the crystal structure of WcbI bound to its proposed product, coenzyme A, is reported at 1.38 Å resolution, solved using the halide-soak method with multiple anomalous dispersion. This structure reveals that WcbI incorporates a previously described 100-amino-acid subdomain into a novel, principally helical fold (310 amino acids). This fold adopts a cradle-like structure, with a deep binding pocket for CoA in the loop-rich cradle. Structural analysis and biophysical assays suggest that WcbI functions as an acetyltransferase enzyme, whilst biochemical tests suggest that another functional module might be required to assist its activity in forming the mature B. pseudomallei capsule.

Indexed as

acetyl-CoAacetyltransferasesBurkholderia pseudomalleicapsular polysaccharidesmelioidosis

Identifiers

PMID25075317
PMCPMC4104973
OpenAlexW2116825531

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.