Evidence map›Paper›PMID 25075129›Full record

ArticleBlood2014

Hematopoietic stem cell dysfunction underlies the progressive lymphocytopenia in XLF/Cernunnos deficiency.

Serine Avagyan, Michael Churchill, Kenta Yamamoto, Jennifer L Crowe, Chen Li, Brian J Lee, Tian Zheng, Siddhartha Mukherjee, Shan Zha

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Serine AvagyanMorgan Stanley Children's Hospital of New York-Presbyterian, Department of Pediatrics, Institute for Cancer Genetics, Herbert Irving Comprehensive Cancer Research Center.
Michael ChurchillHerbert Irving Comprehensive Cancer Research Center, Division of Oncology, Department of Medicine, and.
Kenta YamamotoDepartment of Pediatrics, Institute for Cancer Genetics, Herbert Irving Comprehensive Cancer Research Center, Pathobiology Graduate Program, College for Physicians and Surgeons, Columbia University Medical Center, New York, NY; and.
Jennifer L CroweDepartment of Pediatrics, Institute for Cancer Genetics, Herbert Irving Comprehensive Cancer Research Center, Pathobiology Graduate Program, College for Physicians and Surgeons, Columbia University Medical Center, New York, NY; and.
Chen LiDepartment of Pediatrics, Institute for Cancer Genetics.
Brian J LeeDepartment of Pediatrics, Institute for Cancer Genetics.
Tian ZhengDepartment of Statistics, Columbia University, New York, NY.
Siddhartha MukherjeeDivision of Oncology, Department of Medicine, and.
Shan ZhaMorgan Stanley Children's Hospital of New York-Presbyterian, Department of Pediatrics, Institute for Cancer Genetics.
Cancer Research Center · USCancer Genetics (United States) · USColumbia University · USMorgan Stanley Children's Hospital · US

Funding

The role of ATM in the suppression of lymphoid malignancyR01CA158073 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Shan Zha · 2011 to 2026
$5.7M
Clinical and Translational Science AwardTL1TR000082 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GINSBERG, HENRY N · 2012 to 2015
$732k
The role of XLF in hematopoietic stem cell maintenance and functionR21AI103826 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MUKHERJEE, SIDDHARTHA, ZHA, SHAN · 2013 to 2014
$440k
NCATS NIH HHS TL1 TR000082NCATS NIH HHS TL1TR000082NCI NIH HHS 1R01CA158073NCI NIH HHS R01 CA158073NIAID NIH HHS 1R21AI103826NIAID NIH HHS R21 AI103826
6 · The paper itself

Abstract

XRCC4-like factor (XLF/Cernunnos) is a component of the nonhomologous end-joining (NHEJ) pathway of double-strand DNA break repair. XLF-deficient patients develop a severe progressive lymphocytopenia. Although NHEJ is required for V(D)J recombination and lymphocyte development, XLF-deficient mice have normal V(D)J recombination, highlighting the need for an alternative mechanism for the lymphocytopenia. Here, we report that XLF-deficient mice recapitulate the age-dependent lymphocytopenia of patients. We show that XLF deficiency leads to premature aging of hematopoietic stem cells (HSCs), measured by decreased functional capacity in transplantation assays, preferential myeloid reconstitution, and reduced self-renewal at a young age. We propose that premature aging of HSCs, together with previously reported defects in class-switch recombination and memory immune response, underlies the progressive and severe lymphocytopenia in XLF-deficient patients in the absence of measurable V(D)J recombination defects.

Indexed as

AgingAnimalsCells, CulturedCellular SenescenceDisease ProgressionDNA-Binding ProteinsHematopoietic Stem CellsLymphopeniaMiceMice, Inbred C57BLMice, KnockoutDNA-Binding ProteinsXLF protein, mouse

Identifiers

PMID25075129
PMCPMC4155271
OpenAlexW2110346770

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.