Evidence map›Paper›PMID 25074926›Full record

ArticleThe Journal of biological chemistry2014

Receptor tyrosine kinases, TYRO3, AXL, and MER, demonstrate distinct patterns and complex regulation of ligand-induced activation.

Wen-I Tsou, Khanh-Quynh N Nguyen, Daniel A Calarese, Scott J Garforth, Anita L Antes, Sergey V Smirnov, Steve C Almo, Raymond B Birge, Sergei V Kotenko

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 158 papers.

0numbers the graph read from it
0cells of the map it votes in
158citing papers in PubMed
6.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

158 citing papers in PubMed, 228 citations in OpenAlex.

  1. Trial
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  6. NLRC5-Deficient Macrophages Promote a Tumor-Permissive Phenotype via AXL- and MERTK-Mediated Efferocytosis.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
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98 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Wen-I TsouFrom the Department of Biochemistry and Molecular Biology, University Hospital Cancer Center and Center for Immunity and Inflammation, New Jersey Medical School, Rutgers Biomedical and Health Sciences, Newark, New Jersey 07103, and.
Khanh-Quynh N NguyenFrom the Department of Biochemistry and Molecular Biology, University Hospital Cancer Center and.
Daniel A Calaresethe Department of Biochemistry and.
Scott J Garforththe Department of Biochemistry and.
Anita L AntesFrom the Department of Biochemistry and Molecular Biology, University Hospital Cancer Center and.
Sergey V SmirnovFrom the Department of Biochemistry and Molecular Biology, University Hospital Cancer Center and Center for Immunity and Inflammation, New Jersey Medical School, Rutgers Biomedical and Health Sciences, Newark, New Jersey 07103, and.
Steve C Almothe Department of Biochemistry and Albert Einstein Cancer Center, Albert Einstein College of Medicine of Yeshiva University, Bronx, New York 10461.
Raymond B BirgeFrom the Department of Biochemistry and Molecular Biology, University Hospital Cancer Center and birgera@njms.rutgers.edu.
Sergei V KotenkoFrom the Department of Biochemistry and Molecular Biology, University Hospital Cancer Center and Center for Immunity and Inflammation, New Jersey Medical School, Rutgers Biomedical and Health Sciences, Newark, New Jersey 07103, and kotenkse@njms.rutgers.edu.
Rutgers, The State University of New Jersey · USYeshiva University · USAlbert Einstein College of Medicine · USRutgers Health

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI THOMAS E ROHAN · 1985 to 2026
$111.2M
The NYSGRC: A Large Scale Center for PSI:BiologyU54GM094662 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI ALMO, STEVEN C. · 2010 to 2014
$32.6M
Development of IFN-lambda3 for the Prevention and Treatment of Virus InfectionR01AI104669 · NIAID · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI DURBIN, JOAN E., KOTENKO, SERGEI V · 2013 to 2017
$5.9M
Consortia for High-Throughput-Enabled Structural Biology Partnerships (U01)U01GM094665 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI BAKER, DAVID · 2010 to 2014
$5.5M
NCI NIH HHS P30 CA013330NCI NIH HHS P30CA013330NIAID NIH HHS R01 AI104669NIAID NIH HHS R01AI104669NIGMS NIH HHS GM094662NIGMS NIH HHS GM094665NIGMS NIH HHS U01 GM094665NIGMS NIH HHS U54 GM094662PHS HHS R01NCI165077
6 · The paper itself

Abstract

TYRO3, AXL, and MER receptors (TAMs) are three homologous type I receptor-tyrosine kinases that are activated by endogenous ligands, protein S (PROS1) and growth arrest-specific gene 6 (GAS6). These ligands can either activate TAMs as soluble factors, or, in turn, opsonize phosphatidylserine (PS) on apoptotic cells (ACs) and serve as bridging molecules between ACs and TAMs. Abnormal expression and activation of TAMs have been implicated in promoting proliferation and survival of cancer cells, as well as in suppressing anti-tumor immunity. Despite the fact that TAM receptors share significant similarity, little is known about the specificity of interaction between TAM receptors and their ligands, particularly in the context of ACs, and about the functional diversity of TAM receptors. To study ligand-mediated activation of TAMs, we generated a series of reporter cell lines expressing chimeric TAM receptors. Using this system, we found that each TAM receptor has a unique pattern of interaction with and activation by GAS6 and PROS1, which is also differentially affected by the presence of ACs, PS-containing lipid vesicles and enveloped virus. We also demonstrated that γ-carboxylation of ligands is essential for the full activation of TAMs and that soluble immunoglobulin-like TAM domains act as specific ligand antagonists. These studies demonstrate that, despite their similarity, TYRO3, AXL, and MER are likely to perform distinct functions in both immunoregulation and the recognition and removal of ACs.

Indexed as

ApoptosisAxl Receptor Tyrosine KinaseBlood Proteinsc-Mer Tyrosine KinaseFemaleGene Expression Regulation, NeoplasticGrowth Arrest-Specific Protein 6HumansIntercellular Signaling Peptides and ProteinsJurkat CellsProtein SProto-Oncogene ProteinsReceptor Protein-Tyrosine KinasesSignal TransductionVesicular StomatitisAXL protein, humanAxl Receptor Tyrosine KinaseBlood Proteinsc-Mer Tyrosine KinaseGrowth Arrest-Specific Protein 6Intercellular Signaling Peptides and ProteinsMERTK protein, humanPROS1 protein, humanProtein SProto-Oncogene ProteinsReceptor Protein-Tyrosine KinasesTYRO3 protein, humanApoptosisAXLGAS6MERPhospholipidProtein SReceptor-tyrosine KinaseSignal TransductionTYRO3Virus

Identifiers

PMID25074926
PMCPMC4162177
OpenAlexW2133902177

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.