Evidence map›Paper›PMID 25072697›Full record

ArticlePloS one2014

The yeast histone chaperone hif1p functions with RNA in nucleosome assembly.

Amy R Knapp, Huanyu Wang, Mark R Parthun

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Amy R KnappDepartment of Molecular and Cellular Biochemistry, The Ohio State University, Columbus, Ohio, United States of America.
Huanyu WangDepartment of Molecular and Cellular Biochemistry, The Ohio State University, Columbus, Ohio, United States of America.
Mark R ParthunDepartment of Molecular and Cellular Biochemistry, The Ohio State University, Columbus, Ohio, United States of America.
The Ohio State University · US

Funding

Type B Histone Acetyltransferases and the Assembly of Chromatin StructureR01GM062970 · NIGMS · OHIO STATE UNIVERSITY · PI PARTHUN, MARK R · 2001 to 2018
$5.1M
NIGMS NIH HHS GM062970NIGMS NIH HHS R01 GM062970
6 · The paper itself

Abstract

backgroundHif1p is an H3/H4-specific histone chaperone that associates with the nuclear form of the Hat1p/Hat2p complex (NuB4 complex) in the yeast Saccharomyces cerevisiae. While not capable of depositing histones onto DNA on its own, Hif1p can act in conjunction with a yeast cytosolic extract to assemble nucleosomes onto a relaxed circular plasmid.

resultsTo identify the factor(s) that function with Hif1p to carry out chromatin assembly, multiple steps of column chromatography were carried out to fractionate the yeast cytosolic extract. Analysis of partially purified fractions indicated that Hif1p-dependent chromatin assembly activity resided in RNA rather than protein. Fractionation of isolated RNA indicated that the chromatin assembly activity did not simply purify with bulk RNA. In addition, the RNA-mediated chromatin assembly activity was blocked by mutations in the human homolog of Hif1p, sNASP, that prevent the association of this histone chaperone with histone H3 and H4 without altering its electrostatic properties.

conclusionsThese results suggest that specific RNA species may function in concert with histone chaperones to assemble chromatin.

Indexed as

ChromatinChromatin Assembly and DisassemblyHistone ChaperonesIntracellular SpaceMutationNucleosomesProtein BindingProtein Interaction Domains and MotifsProtein TransportRNASaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsYeastsChromatinHistone ChaperonesNucleosomesRNASaccharomyces cerevisiae Proteins

Identifiers

PMID25072697
PMCPMC4114455
OpenAlexW2058898739

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.