Evidence map›Paper›PMID 25071810›Full record

ReviewFrontiers in plant science2014

Experimental data and computational modeling link auxin gradient and development in the Arabidopsis root.

Natalie M Clark, Maria A de Luis Balaguer, Rosangela Sozzani

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in plant science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 19 citations in OpenAlex.

  1. Expression ofPlants (Basel, Switzerland) · 2023
    Article
  2. Article
  3. Altered Root Growth, Auxin Metabolism and Distribution inInternational journal of molecular sciences · 2021
    Article
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Natalie M ClarkDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh NC, USA.
Maria A de Luis BalaguerDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh NC, USA.
Rosangela SozzaniDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh NC, USA.
North Carolina State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The presence of an auxin gradient in the Arabidopsis root is crucial for proper root development and importantly, for stem cell niche (SCN) maintenance. Subsequently, developmental pathways in the root SCN regulate the formation of the auxin gradient. Combinations of experimental data and computational modeling enable the identification of pathways involved in establishing and maintaining the auxin gradient. We describe how the predictive power of these computational models is used to find how genes and their interactions tightly control the formation of an auxin maximum in the SCN. In addition, we highlight known connections between signaling pathways involving auxin and controlling patterning and development in Arabidopsis.

Indexed as

Arabidopsisauxin gradientcomputational modelingroot developmentstem cell niche

Identifiers

PMID25071810
PMCPMC4083358
OpenAlexW2108695575

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.