Evidence map›Paper›PMID 25070807›Full record

ArticleCell host & microbe2014

A type VI secretion-related pathway in Bacteroidetes mediates interbacterial antagonism.

Alistair B Russell, Aaron G Wexler, Brittany N Harding, John C Whitney, Alan J Bohn, Young Ah Goo, Bao Q Tran, Natasha A Barry, Hongjin Zheng, S Brook Peterson and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell host & microbe, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 229 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
229citing papers in PubMed, 1 pooled it
20.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

229 citing papers in PubMed, 1 synthesis or guideline pooled it, 362 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
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  11. The island biology of the host microbiome.Trends in microbiology · 2026
    Review
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  14. Comparison of virulence factors genes between exoU and exoS Pseudomonas aeruginosa in microbial keratitis.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
    Article
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  19. AmicroLife · 2026
    Article
  20. FEMS microbes · 2026
    Article

169 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 1 country.

Alistair B RussellDepartment of Microbiology, University of Washington, Seattle, WA 98195, USA.
Aaron G WexlerDepartment of Microbial Pathogenesis and Microbial Diversity Institute, Yale University School of Medicine, New Haven, CT 06536, USA.
Brittany N HardingDepartment of Microbiology, University of Washington, Seattle, WA 98195, USA.
John C WhitneyDepartment of Microbiology, University of Washington, Seattle, WA 98195, USA.
Alan J BohnDepartment of Microbiology, University of Washington, Seattle, WA 98195, USA.
Young Ah GooDepartment of Pharmaceutical Sciences, School of Pharmacy, University of Maryland, Baltimore, MD 21201, USA.
Bao Q TranDepartment of Pharmaceutical Sciences, School of Pharmacy, University of Maryland, Baltimore, MD 21201, USA.
Natasha A BarryDepartment of Microbial Pathogenesis and Microbial Diversity Institute, Yale University School of Medicine, New Haven, CT 06536, USA.
Hongjin ZhengJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
S Brook PetersonDepartment of Microbiology, University of Washington, Seattle, WA 98195, USA.
Seemay ChouDepartment of Microbiology, University of Washington, Seattle, WA 98195, USA.
Tamir GonenJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
David R GoodlettDepartment of Pharmaceutical Sciences, School of Pharmacy, University of Maryland, Baltimore, MD 21201, USA.
Andrew L GoodmanDepartment of Microbial Pathogenesis and Microbial Diversity Institute, Yale University School of Medicine, New Haven, CT 06536, USA. Electronic address: andrew.goodman@yale.edu.
Joseph D MougousDepartment of Microbiology, University of Washington, Seattle, WA 98195, USA. Electronic address: mougous@u.washington.edu.
University of Washington · USUniversity of Maryland, Baltimore · USYale University · USHoward Hughes Medical Institute · USJanelia Research Campus · US

Funding

Type VI secretion effectors and interbacterial competition in vivoR01AI080609 · NIAID · YALE UNIVERSITY · PI MOUGOUS, JOSEPH DAVID · 2009 to 2025
$6.7M
PREDOCTORAL TRAINING PROGRAM IN MICROBIAL PATHOGENESIST32AI007640 · NIAID · YALE UNIVERSITY · PI GOODMAN, ANDREW L · 2000 to 2022
$4.3M
Defining the contribution of interpersonal microbial variation to drug metabolismDP2GM105456 · NIGMS · YALE UNIVERSITY · PI GOODMAN, ANDREW L · 2012 to 2017
$3.0M
Molecular recognition of vitamin B12 and related compounds in human gut microbialR01GM103574 · NIGMS · YALE UNIVERSITY · PI GOODMAN, ANDREW L · 2013 to 2016
$1.2M
Corrinoid Response of the Human Gut MicrobiotaK01DK089121 · NIDDK · YALE UNIVERSITY · PI GOODMAN, ANDREW L · 2010 to 2014
$597k
Linking apparatus dynamics to interbacterial intoxication by type VI secretionR21AI105268 · NIAID · UNIVERSITY OF WASHINGTON · PI MOUGOUS, JOSEPH DAVID, WIGGINS, PAUL A · 2013 to 2014
$412k
CIHRHoward Hughes Medical InstituteNIAID NIH HHS AI080609NIAID NIH HHS AI105268NIAID NIH HHS R01 AI080609NIAID NIH HHS R21 AI105268NIAID NIH HHS T32 AI007640NIDDK NIH HHS DK089121NIDDK NIH HHS K01 DK089121NIGMS NIH HHS DP2 GM105456NIGMS NIH HHS GM103574NIGMS NIH HHS GM105456NIGMS NIH HHS R01 GM103574
6 · The paper itself

Abstract

Bacteroidetes are a phylum of Gram-negative bacteria abundant in mammalian-associated polymicrobial communities, where they impact digestion, immunity, and resistance to infection. Despite the extensive competition at high cell density that occurs in these settings, cell contact-dependent mechanisms of interbacterial antagonism, such as the type VI secretion system (T6SS), have not been defined in this group of organisms. Herein we report the bioinformatic and functional characterization of a T6SS-like pathway in diverse Bacteroidetes. Using prominent human gut commensal and soil-associated species, we demonstrate that these systems localize dynamically within the cell, export antibacterial proteins, and target competitor bacteria. The Bacteroidetes system is a distinct pathway with marked differences in gene content and high evolutionary divergence from the canonical T6S pathway. Our findings offer a potential molecular explanation for the abundance of Bacteroidetes in polymicrobial environments, the observed stability of Bacteroidetes in healthy humans, and the barrier presented by the microbiota against pathogens.

Indexed as

AntibiosisBacterial Secretion SystemsBacterial ProteinsFlavobacteriumGenes, BacterialMultigene FamilyPhylogenyBacterial ProteinsBacterial Secretion Systems

Identifiers

PMID25070807
PMCPMC4136423
OpenAlexW2108687405

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.