Evidence map›Paper›PMID 25070431›Full record

ArticleThe Journal of general physiology2014

F-/Cl- selectivity in CLCF-type F-/H+ antiporters.

Ashley E Brammer, Randy B Stockbridge, Christopher Miller

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 55 citations in OpenAlex.

  1. Adaptive evolution ofJournal of bacteriology · 2026
    Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Fluoride Ion Binding and Translocation in the CLCThe journal of physical chemistry. B · 2024
    Article
  7. Article
  8. Article
  9. Fluoride Transport and Inhibition Across CLC Transporters.Handbook of experimental pharmacology · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. Membrane Exporters of Fluoride Ion.Annual review of biochemistry · 2021
    Review
  14. Article
  15. Article
  16. Census of halide-binding sites in protein structures.Bioinformatics (Oxford, England) · 2020
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Ashley E BrammerDepartment of Biochemistry and Howard Hughes Medical Institute, Brandeis University, Waltham, MA 02453Department of Biochemistry and Howard Hughes Medical Institute, Brandeis University, Waltham, MA 02453.
Randy B StockbridgeDepartment of Biochemistry and Howard Hughes Medical Institute, Brandeis University, Waltham, MA 02453Department of Biochemistry and Howard Hughes Medical Institute, Brandeis University, Waltham, MA 02453.
Christopher MillerDepartment of Biochemistry and Howard Hughes Medical Institute, Brandeis University, Waltham, MA 02453Department of Biochemistry and Howard Hughes Medical Institute, Brandeis University, Waltham, MA 02453 cmiller@brandeis.edu.
Brandeis University · USHoward Hughes Medical Institute · US

Funding

Macromolecular Structure MechanismT32GM007596 · NIGMS · BRANDEIS UNIVERSITY · PI OPRIAN, DANIEL D · 1985 to 2019
$4.5M
Mechanisms of Biological Fluoride Resistance ExportersR01GM107023 · NIGMS · BRANDEIS UNIVERSITY · PI MILLER, CHRISTOPHER · 2014 to 2017
$1.1M
NIGMS NIH HHS R01 GM107023NIGMS NIH HHS T32 GM007596NIGMS NIH HHS T32-GM007596
6 · The paper itself

Abstract

Many bacterial species protect themselves against environmental F(-) toxicity by exporting this anion from the cytoplasm via CLC(F) F(-)/H(+) antiporters, a subclass of CLC superfamily anion transporters. Strong F(-) over Cl(-) selectivity is biologically essential for these membrane proteins because Cl(-) is orders of magnitude more abundant in the biosphere than F(-). Sequence comparisons reveal differences between CLC(F)s and canonical Cl(-)-transporting CLCs within regions that, in the canonical CLCs, coordinate Cl(-) ion and govern anion transport. A phylogenetic split within the CLC(F) clade, manifested in sequence divergence in the vicinity of this ion-binding center, raises the possibility that these two CLC(F) subclades might exhibit differences in anion selectivity. Several CLC(F) homologues from each subclade were examined for F(-)/Cl(-) selectivity of anion transport and equilibrium binding. Differences in both of these anion-selectivity metrics correlate with sequence divergence among CLC(F)s. Chimeric constructs identify two residues in this region that largely account for the subclade differences in selectivity. In addition, these experiments serendipitously uncovered an unusually steep, Cl(-)-specific voltage dependence of transport that greatly enhances F(-) selectivity at low voltage.

Indexed as

AntiportersChloride ChannelsChlorineEscherichia coliFluorineIon TransportMutationPhylogenyProtein ConformationProton PumpsAntiportersChloride ChannelsChlorineFluorineProton Pumps

Identifiers

PMID25070431
PMCPMC4113899
OpenAlexW2059131094

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.