Evidence map›Paper›PMID 25069779›Full record

ArticleBreast cancer research : BCR2014

A genomic analysis of mouse models of breast cancer reveals molecular features of mouse models and relationships to human breast cancer.

Daniel P Hollern, Eran R Andrechek

Abstract read
In one paragraph

Article in Breast cancer research : BCR, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed.

  1. Review
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  4. Rat Models of Hormone Receptor-Positive Breast Cancer.Journal of mammary gland biology and neoplasia · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Daniel P Hollern
Eran R Andrechek

Funding

Dissecting Tumor Heterogeneity by Analyzing Signaling Pathway Requirements.R01CA160514 · NCI · MICHIGAN STATE UNIVERSITY · PI ANDRECHEK, ERAN ROBERT · 2012 to 2016
$1.5M
NCI NIH HHS 1R01CA160514NCI NIH HHS R01 CA160514
6 · The paper itself

Abstract

introductionGenomic variability limits the efficacy of breast cancer therapy. To simplify the study of the molecular complexity of breast cancer, researchers have used mouse mammary tumor models. However, the degree to which mouse models model human breast cancer and are reflective of the human heterogeneity has yet to be demonstrated with gene expression studies on a large scale.

methodsTo this end, we have built a database consisting of 1,172 mouse mammary tumor samples from 26 different major oncogenic mouse mammary tumor models.

resultsIn this dataset we identified heterogeneity within mouse models and noted a surprising amount of interrelatedness between models, despite differences in the tumor initiating oncogene. Making comparisons between models, we identified differentially expressed genes with alteration correlating with initiating events in each model. Using annotation tools, we identified transcription factors with a high likelihood of activity within these models. Gene signatures predicted activation of major cell signaling pathways in each model, predictions that correlated with previous genetic studies. Finally, we noted relationships between mouse models and human breast cancer at both the level of gene expression and predicted signal pathway activity. Importantly, we identified individual mouse models that recapitulate human breast cancer heterogeneity at the level of gene expression.

conclusionsThis work underscores the importance of fully characterizing mouse tumor biology at molecular, histological and genomic levels before a valid comparison to human breast cancer may be drawn and provides an important bioinformatic resource.

Indexed as

Databases, GeneticAnimalsBreast NeoplasmsComputational BiologyDisease Models, AnimalFemaleGene ExpressionGene Expression ProfilingGene Expression Regulation, NeoplasticGenetic VariationGenomicsHumansMammary Neoplasms, AnimalMammary Tumor Virus, MouseMiceOligonucleotide Array Sequence Analysis

Identifiers

PMID25069779
PMCPMC4078930

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.