Evidence map›Paper›PMID 25065861›Full record

ArticlePsychological medicine2014

Longitudinal epigenetic variation of DNA methyltransferase genes is associated with vulnerability to post-traumatic stress disorder.

L Sipahi, D E Wildman, A E Aiello, K C Koenen, S Galea, A Abbas, M Uddin

Open access · greenAbstract read
In one paragraph

Article in Psychological medicine, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it, 55 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Heritability of Cortisol Production and Metabolism Throughout Adolescence.The Journal of clinical endocrinology and metabolism · 2020
    Article
  10. DNA methylation correlates of PTSD: Recent findings and technical challenges.Progress in neuro-psychopharmacology & biological psychiatry · 2019
    Review
  11. Article
  12. Observational
  13. Article
  14. Article
  15. Article
  16. Traumatic Stress Epigenetics.Current behavioral neuroscience reports · 2018
    Article
  17. Neuroepigenetics of Post-Traumatic Stress Disorder.Progress in molecular biology and translational science · 2018
    Review
  18. Epigenome-wide association of PTSD from heterogeneous cohorts with a common multi-site analysis pipeline.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2017
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

L SipahiCenter for Molecular Medicine and Genetics,Wayne State University School of Medicine,Detroit, MI,USA.
D E WildmanCenter for Molecular Medicine and Genetics,Wayne State University School of Medicine,Detroit, MI,USA.
A E AielloDepartment of Epidemiology,University of North Carolina Gillings School of Global Public Health,Chapel Hill, NC,USA.
K C KoenenDepartment of Epidemiology, Mailman School of Public Health,Columbia University,New York, NY,USA.
S GaleaDepartment of Epidemiology, Mailman School of Public Health,Columbia University,New York, NY,USA.
A AbbasCenter for Molecular Medicine and Genetics,Wayne State University School of Medicine,Detroit, MI,USA.
M UddinCenter for Molecular Medicine and Genetics,Wayne State University School of Medicine,Detroit, MI,USA.
Wayne State University · USColumbia University · USUniversity of North Carolina at Chapel Hill · US

Funding

YNPRC NHP CLINICAL MEDICINE RESIDENCY PROGRAM - SUPPLEMENTP51RR000165 · NCRR · EMORY UNIVERSITY · PI ALTMAN, JOHN DAVID · 1985 to 2011
$114.0M
Research Services CoreP2CHD050924 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KAREN B GUZZO · 2015 to 2026
$9.6M
Ecologic Stressors, PTSD, and Drug Use in DetroitR01DA022720 · NIDA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI AIELLO, ALLISON E · 2007 to 2011
$4.7M
Biomarkers of Psychological Risk and Resilience in World Trade Center RespondersU01OH010407 · OH · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI FEDER, ADRIANA, PIETRZAK, ROBERT H · 2012 to 2015
$4.0M
The Cross-National Epidemiology of Trauma Exposure and PTSDR01MH093612 · NIMH · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI KOENEN, KARESTAN C · 2011 to 2013
$2.0M
Using GWAS Data for Enhanced Mendelian Randomization StudiesRC4MH092707 · NIMH · HARVARD SCHOOL OF PUBLIC HEALTH · PI KUBZANSKY, LAURA D · 2010 to 2010
$1.5M
Epigenetic Linkage Between PTSD and Respiratory Disease in WTC RespondersU01OH010416 · OH · STATE UNIVERSITY NEW YORK STONY BROOK · PI LUFT, BENJAMIN J · 2012 to 2013
$1000k
Candidate Epigenetic Biomarkers For PTSD: Insights From DetroitRC1MH088283 · NIMH · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI AIELLO, ALLISON E · 2009 to 2010
$995k
ACL HHS U01OH010407NCRR NIH HHS P51 RR000165NICHD NIH HHS P2C HD050924NIDA NIH HHS R01 DA022720NIMH NIH HHS R01 MH093612NIMH NIH HHS RC1 MH088283NIMH NIH HHS RC4 MH092707NIOSH CDC HHS U01 OH010407NIOSH CDC HHS U01 OH010416
6 · The paper itself

Abstract

backgroundEpigenetic differences exist between trauma-exposed individuals with and without post-traumatic stress disorder (PTSD). It is unclear whether these epigenetic differences pre-exist, or arise following, trauma and PTSD onset.

methodIn pre- and post-trauma samples from a subset of Detroit Neighborhood Health Study participants, DNA methylation (DNAm) was measured at DNA methyltransferase 1 (DNMT1), DNMT3A, DNMT3B and DNMT3L. Pre-trauma DNAm differences and changes in DNAm from pre- to post-trauma were assessed between and within PTSD cases (n = 30) and age-, gender- and trauma exposure-matched controls (n = 30). Pre-trauma DNAm was tested for association with post-trauma symptom severity (PTSS) change. Potential functional consequences of DNAm differences were explored via bioinformatic search for putative transcription factor binding sites (TFBS).

resultsDNMT1 DNAm increased following trauma in PTSD cases (p = 0.001), but not controls (p = 0.067). DNMT3A and DNMT3B DNAm increased following trauma in both cases (DNMT3A: p = 0.009; DNMT3B: p < 0.001) and controls (DNMT3A: p = 0.002; DNMT3B: p < 0.001). In cases only, pre-trauma DNAm was lower at a DNMT3B CpG site that overlaps with a TFBS involved in epigenetic regulation (p = 0.001); lower pre-trauma DNMT3B DNAm at this site was predictive of worsening of PTSS post-trauma (p = 0.034). Some effects were attenuated following correction for multiple hypothesis testing.

conclusionsDNAm among trauma-exposed individuals shows both longitudinal changes and pre-existing epigenetic states that differentiate individuals who are resilient versus susceptible to PTSD. These distinctive DNAm differences within DNMT loci may contribute to genome-wide epigenetic profiles of PTSD.

Indexed as

AdultAgedDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNA MethylationDNA Methyltransferase 3ADNA Methyltransferase 3BEpigenesis, GeneticFemaleGenetic Predisposition to DiseaseHumansLongitudinal StudiesMaleMiddle AgedSeverity of Illness IndexStress Disorders, Post-TraumaticDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3ADNA Methyltransferase 3BDNMT1 protein, humanDNMT3A protein, humanDNMT3L protein, human

Identifiers

PMID25065861
PMCPMC4530981
OpenAlexW2048808569

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.