Evidence map›Paper›PMID 25063871›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2014

Compensatory mechanisms allow undersized anchor-deficient class I MHC ligands to mediate pathogenic autoreactive T cell responses.

Deanna Lamont, Gayatri Mukherjee, P Rajesh Kumar, Dibyendu Samanta, Caroline G McPhee, Thomas W H Kay, Steven C Almo, Teresa P DiLorenzo, David V Serreze

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Deletion of Vβ3Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. A HypermorphicJournal of immunology (Baltimore, Md. : 1950) · 2018
    Article
  12. Article
  13. Article
  14. Adoptive Transfer of mRNA-Transfected T Cells Redirected against Diabetogenic CD8 T Cells Can Prevent Diabetes.Molecular therapy : the journal of the American Society of Gene Therapy · 2017
    Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Deanna LamontThe Jackson Laboratory, Bar Harbor, ME 04609;
Gayatri MukherjeeDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, NY 10461;
P Rajesh KumarDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461;
Dibyendu SamantaDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, NY 10461;
Caroline G McPheeThe Jackson Laboratory, Bar Harbor, ME 04609;
Thomas W H KaySt. Vincent's Institute, Fitzroy, Victoria 3065, Australia; Department of Medicine, The University of Melbourne, St. Vincent's Hospital, Fitzroy, Victoria 3065, Australia; and.
Steven C AlmoDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461;
Teresa P DiLorenzoDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, NY 10461; Division of Endocrinology, Department of Medicine, Albert Einstein College of Medicine, Bronx, NY 10461 teresa.dilorenzo@einstein.yu.edu dave.serreze@jax.org.
David V SerrezeThe Jackson Laboratory, Bar Harbor, ME 04609; teresa.dilorenzo@einstein.yu.edu dave.serreze@jax.org.
Albert Einstein College of Medicine · USJackson Laboratory · USUniversity of Melbourne · AU

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI ALYSON B MOADEL · 1985 to 2026
$111.2M
Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI Jeffrey Hsu-Min Chuang · 1985 to 2026
$61.9M
The NYSGRC: A Large Scale Center for PSI:BiologyU54GM094662 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI SEIDEL, RONALD D · 2010 to 2014
$32.6M
Stable Isotope and Metabolomics CoreP60DK020541 · NIDDK · YESHIVA UNIVERSITY · PI PESSIN, JEFFREY E. · 1986 to 2014
$29.8M
Diabetogenic Role of MHC Class I Alleles in NOD MiceR01DK046266 · NIDDK · JACKSON LABORATORY · PI SERREZE, DAVID V · 2000 to 2018
$7.2M
B-lymphocyte Targeting Therapies for Autoimmune DiabetesR01DK095735 · NIDDK · JACKSON LABORATORY · PI SERREZE, DAVID V · 2013 to 2025
$6.2M
Consortia for High-Throughput-Enabled Structural Biology Partnerships (U01)U01GM094665 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI CASADEVALL, ARTURO · 2010 to 2014
$5.5M
Antigens Recognized by CD8+ T Cells in Type 1 DiabetesR01DK064315 · NIDDK · YESHIVA UNIVERSITY · PI DILORENZO, TERESA P · 2003 to 2015
$3.8M
T Cell Tolerance by DEC-205-mediated Islet Antigen Delivery to Dendritic CellsR01DK094327 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI DILORENZO, TERESA P · 2011 to 2015
$1.8M
NCI NIH HHS P30 CA013330NCI NIH HHS P30 CA034196NIDDK NIH HHS P60 DK020541NIDDK NIH HHS R01 DK046266NIDDK NIH HHS R01 DK064315NIDDK NIH HHS R01 DK094327NIDDK NIH HHS R01 DK095735NIGMS NIH HHS U01 GM094665NIGMS NIH HHS U54 GM094662
6 · The paper itself

Abstract

Self-reactive T cells must escape thymic negative selection to mediate pathogenic autoimmunity. In the NOD mouse model of autoimmune diabetes, several β cell-cytotoxic CD8 T cell populations are known, with the most aggressive of these represented by AI4, a T cell clone with promiscuous Ag-recognition characteristics. We identified a long-elusive β cell-specific ligand for AI4 as an unusually short H-2D(b)-binding 7-mer peptide lacking a C-terminal anchor residue and derived from the insulin A chain (InsA14-20). Crystallography reveals that compensatory mechanisms permit peptides lacking a C-terminal anchor to bind sufficiently to the MHC to enable destructive T cell responses, yet allow cognate T cells to avoid negative selection. InsA14-20 shares two solvent-exposed residues with previously identified AI4 ligands, providing a structural explanation for AI4's promiscuity. Detection of AI4-like T cells, using mimotopes of InsA14-20 with improved H-2D(b)-binding characteristics, establishes the AI4-like T cell population as a consistent feature of the islet infiltrates of NOD mice. Our work establishes undersized peptides as previously unrecognized targets of autoreactive CD8 T cells and presents a strategy for their further exploration as Ags in autoimmune disease.

Indexed as

AnimalsCD8-Positive T-LymphocytesCrystallography, X-RayDiabetes Mellitus, ExperimentalDiabetes Mellitus, Type 1Histocompatibility Antigens Class IMiceMice, Inbred NODMice, TransgenicPeptidesStructure-Activity RelationshipHistocompatibility Antigens Class IPeptides

Identifiers

PMID25063871
PMCPMC4134999
OpenAlexW1514822796

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.