Evidence map›Paper›PMID 25063666›Full record

ArticleApplied and environmental microbiology2014

Microbial community stratification controlled by the subseafloor fluid flow and geothermal gradient at the Iheya North hydrothermal field in the Mid-Okinawa Trough (Integrated Ocean Drilling Program Expedition 331).

Katsunori Yanagawa, Anja Breuker, Axel Schippers, Manabu Nishizawa, Akira Ijiri, Miho Hirai, Yoshihiro Takaki, Michinari Sunamura, Tetsuro Urabe, Takuro Nunoura and 1 more

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Microorganisms · 2023
    Article
  3. Characterization of archaeal and bacterial communities thriving in methane-seeping on-land mud volcanoes, Niigata, Japan.International microbiology : the official journal of the Spanish Society for Microbiology · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Katsunori YanagawaDepartment of Subsurface Geobiological Analysis and Research, Japan Agency for Marine-Earth Science and Technology, Yokosuka, Japan Department of Earth and Planetary Science, University of Tokyo, Tokyo, Japan kyanagawa@jamstec.go.jp.
Anja BreukerGeomicrobiology, Federal Institute for Geosciences and Natural Resources, Hannover, Germany.
Axel SchippersGeomicrobiology, Federal Institute for Geosciences and Natural Resources, Hannover, Germany.
Manabu NishizawaLaboratory of Ocean-Earth Life Evolution Research, Japan Agency for Marine-Earth Science and Technology, Yokosuka, Japan.
Akira IjiriGeomicrobiology Group, Kochi Institute for Core Sample Research, Japan Agency for Marine-Earth Science and Technology, Kochi, Japan.
Miho HiraiMarine Functional Biology Group, Research and Development Center for Marine Biosciences, Japan Agency for Marine-Earth Science and Technology, Yokosuka, Japan.
Yoshihiro TakakiDepartment of Subsurface Geobiological Analysis and Research, Japan Agency for Marine-Earth Science and Technology, Yokosuka, Japan.
Michinari SunamuraDepartment of Earth and Planetary Science, University of Tokyo, Tokyo, Japan.
Tetsuro UrabeDepartment of Earth and Planetary Science, University of Tokyo, Tokyo, Japan.
Takuro NunouraMarine Functional Biology Group, Research and Development Center for Marine Biosciences, Japan Agency for Marine-Earth Science and Technology, Yokosuka, Japan.
Ken TakaiDepartment of Subsurface Geobiological Analysis and Research, Japan Agency for Marine-Earth Science and Technology, Yokosuka, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The impacts of lithologic structure and geothermal gradient on subseafloor microbial communities were investigated at a marginal site of the Iheya North hydrothermal field in the Mid-Okinawa Trough. Subsurface marine sediments composed of hemipelagic muds and volcaniclastic deposits were recovered through a depth of 151 m below the seafloor at site C0017 during Integrated Ocean Drilling Program Expedition 331. Microbial communities inferred from 16S rRNA gene clone sequencing in low-temperature hemipelagic sediments were mainly composed of members of the Chloroflexi and deep-sea archaeal group. In contrast, 16S rRNA gene sequences of marine group I Thaumarchaeota dominated the microbial phylotype communities in the coarse-grained pumiceous gravels interbedded between the hemipelagic sediments. Based on the physical properties of sediments such as temperature and permeability, the porewater chemistry, and the microbial phylotype compositions, the shift in the physical properties of the sediments is suggested to induce a potential subseafloor recharging flow of oxygenated seawater in the permeable zone, leading to the generation of variable chemical environments and microbial communities in the subseafloor habitats. In addition, the deepest section of sediments under high-temperature conditions (∼90°C) harbored the sequences of an uncultivated archaeal lineage of hot water crenarchaeotic group IV that may be associated with the high-temperature hydrothermal fluid flow. These results indicate that the subseafloor microbial community compositions and functions at the marginal site of the hydrothermal field are highly affected by the complex fluid flow structure, such as recharging seawater and underlying hydrothermal fluids, coupled with the lithologic transition of sediments.

Indexed as

ArchaeaBacteriaBase SequenceCluster AnalysisDNA, ArchaealDNA, BacterialDNA PrimersEcosystemExpeditionsGeographyGeologic SedimentsHydrothermal VentsOceans and SeasRNA, Ribosomal, 16SSeawaterSequence Analysis, DNADNA, ArchaealDNA, BacterialDNA PrimersRNA, Ribosomal, 16S

Identifiers

PMID25063666
PMCPMC4178666

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.