Evidence map›Paper›PMID 25062658›Full record

ArticleJournal of biotechnology2014

Glycosylation-related genes in NS0 cells are insensitive to moderately elevated ammonium concentrations.

Arthur Nathan Brodsky, Mary Caldwell, Sooneon Bae, Sarah W Harcum

Abstract read
In one paragraph

Article in Journal of biotechnology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Animal Cell Expression Systems.Advances in biochemical engineering/biotechnology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Arthur Nathan BrodskyDepartment of Bioengineering, 301 Rhodes Research Center, Clemson University, Clemson, SC 29634-0905, USA. Electronic address: abrodsk@clemson.edu.
Mary CaldwellDepartment of Bioengineering, 301 Rhodes Research Center, Clemson University, Clemson, SC 29634-0905, USA. Electronic address: caldwe5@clemson.edu.
Sooneon BaeDepartment of Bioengineering, 301 Rhodes Research Center, Clemson University, Clemson, SC 29634-0905, USA. Electronic address: sbae@clemson.edu.
Sarah W HarcumDepartment of Bioengineering, 301 Rhodes Research Center, Clemson University, Clemson, SC 29634-0905, USA. Electronic address: harcum@clemson.edu.
Clemson University · US

Funding

Structural Basis of Immune Recognition of Glycosylated AntigensU54GM062116 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI SASISEKHARAN, RAM · 2001 to 2010
$80.3M
Targeted Nano-therapeutics for Neural RegenerationP20GM103444 · NIGMS · CLEMSON UNIVERSITY · PI MARKWALD, ROGER R, VYAVAHARE, NAREN R · 2012 to 2018
$14.9M
NIGMS NIH HHS GM62116NIGMS NIH HHS P20 GM103444NIGMS NIH HHS P20GM103444NIGMS NIH HHS U54 GM062116
6 · The paper itself

Abstract

NS0 and Chinese hamster ovary (CHO) cell lines are used to produce recombinant proteins for human therapeutics; however, ammonium accumulation can negatively impact cell growth, recombinant protein production, and protein glycosylation. To improve product quality and decrease costs, the relationship between ammonium and protein glycosylation needs to be elucidated. While ammonium has been shown to adversely affect glycosylation-related gene expression in CHO cells, NS0 studies have not been performed. Therefore, this study sought to determine if glycosylation in NS0 cells were ammonium-sensitive at the gene expression level. Using a DNA microarray that contained mouse glycosylation-related and housekeeping genes, these genes were analyzed in response to various culture conditions - elevated ammonium, elevated salt, and elevated ammonium with proline. Surprisingly, no significant differences in gene expression levels were observed between the control and these conditions. Further, the elevated ammonium cultures were analyzed using real-time quantitative reverse transcriptase PCR (qRT-PCR) for key glycosylation genes, and the qRT-PCR results corroborated the DNA microarray results, demonstrating that NS0 cells are ammonium-insensitive at the gene expression level. Since NS0 are known to have elevated nucleotide sugar pools under ammonium stress, and none of the genes directly responsible for these metabolic pools were changed, consequently cellular control at the translational or substrate-level must be responsible for the universally observed decreased glycosylation quality under elevated ammonium.

Indexed as

BioreactorsAmmonium CompoundsAnimalsCell Line, TumorCell ProliferationCHO CellsCricetinaeCricetulusCulture MediaGene ExpressionGlycosylationGlycosyltransferasesMiceOligonucleotide Array Sequence AnalysisAmmonium CompoundsCulture MediaGlycosyltransferasesBiopharmaceuticalsCHO cellsDNA microarraysGlycosylationMammalian cells

Identifiers

PMID25062658
PMCPMC4197068
OpenAlexW1989916121

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.