Evidence map›Paper›PMID 25061879›Full record

ArticleThe Journal of clinical investigation2014

Targeted p16(Ink4a) epimutation causes tumorigenesis and reduces survival in mice.

Da-Hai Yu, Robert A Waterland, Pumin Zhang, Deborah Schady, Miao-Hsueh Chen, Yongtao Guan, Manasi Gadkari, Lanlan Shen

Abstract read
In one paragraph

Article in The Journal of clinical investigation, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 88 citations in OpenAlex.

  1. Article
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  5. Article
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  8. Article
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  10. Article
  11. Review
  12. Article
  13. Epigenetic Changes and Functions in Pneumoconiosis.Oxidative medicine and cellular longevity · 2022
    Review
  14. Article
  15. Epigenetics and sarcoidosis.European respiratory review : an official journal of the European Respiratory Society · 2021
    Review
  16. Multi-Omics Model Applied to Cancer Genetics.International journal of molecular sciences · 2021
    Review
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Da-Hai Yu
Robert A Waterland
Pumin Zhang
Deborah Schady
Miao-Hsueh Chen
Yongtao Guan
Manasi Gadkari
Lanlan Shen
Children's Nutrition Research Center at Baylor College of Medicine · USInstitute of Molecular Biology and Biophysics · RUTexas Children's Hospital · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI DAVID R ROWLEY · 2007 to 2026
$73.9M
Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI Geoffrey A Preidis · 2001 to 2026
$28.3M
Epigenetic Mechanisms in ObesityR01DK081557 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI WATERLAND, ROBERT A · 2008 to 2012
$1.5M
NCI NIH HHS P30 CA125123NCI NIH HHS P30CA125123NIDDK NIH HHS 1R01DK081557NIDDK NIH HHS P30 DK056338NIDDK NIH HHS P30DK56338NIDDK NIH HHS R01 DK081557
6 · The paper itself

Abstract

Cancer has long been viewed as a genetic disease; however, epigenetic silencing as the result of aberrant promoter DNA methylation is frequently associated with cancer development, suggesting an epigenetic component to the disease. Nonetheless, it has remained unclear whether an epimutation (an aberrant change in epigenetic regulation) can induce tumorigenesis. Here, we exploited a functionally validated cis-acting regulatory element and devised a strategy to induce developmentally regulated genomic targeting of DNA methylation. We used this system to target DNA methylation within the p16(Ink4a) promoter in mice in vivo. Engineered p16(Ink4a) promoter hypermethylation led to transcriptional suppression in somatic tissues during aging and increased the incidence of spontaneous cancers in these mice. Further, mice carrying a germline p16(Ink4a) mutation in one allele and a somatic epimutation in the other had accelerated tumor onset and substantially shortened tumor-free survival. Taken together, these results provide direct functional evidence that p16(Ink4a) epimutation drives tumor formation and malignant progression and validate a targeted methylation approach to epigenetic engineering.

Indexed as

CarcinogenesisDNAMutationAnimalsCpG IslandsCyclin-Dependent Kinase Inhibitor p16MicePromoter Regions, GeneticCyclin-Dependent Kinase Inhibitor p16DNA

Identifiers

PMID25061879
PMCPMC4151219
OpenAlexW2166670739

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.