Evidence map›Paper›PMID 25060389›Full record

ArticleHuman heredity2014

Association of common genetic variants with diabetes and metabolic syndrome related traits in the Arizona Insulin Resistance registry: a focus on Mexican American families in the Southwest.

Jacob DeMenna, Sobha Puppala, Geetha Chittoor, Jennifer Schneider, Joon Young Kim, Gabriel Q Shaibi, Lawrence J Mandarino, Ravindranath Duggirala, Dawn K Coletta

Abstract read
In one paragraph

Article in Human heredity, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 2 pooled it
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 2 syntheses or guidelines pooled it, 46 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Macronutrient-specific effect of theJournal of lipid research · 2018
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  9. Genes · 2022
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  14. Zinc as a Biomarker of Cardiovascular Health.Frontiers in nutrition · 2021
    Review
  15. SNPs in the 3'-untranslated region ofJournal of diabetes and metabolic disorders · 2020
    Article
  16. Article
  17. PCOS-GWAS Susceptibility Variants inFrontiers in endocrinology · 2020
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Jacob DeMennaSchool of Life Sciences, Arizona State University, Tempe, Ariz., USA.
Sobha Puppala
Geetha Chittoor
Jennifer Schneider
Joon Young Kim
Gabriel Q Shaibi
Lawrence J Mandarino
Ravindranath Duggirala
Dawn K Coletta
Texas Biomedical Research Institute · USMayo Clinic in Arizona · USArizona State University · US

Funding

MOLECULAR REGULATION OF MUSCLE GLUCOSE METABOLISM IN MANR01DK047936 · NIDDK · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI MANDARINO, LAWRENCE J · 1994 to 2022
$10.7M
PGC-1 & Muscle Mitochondrial Dysfunction in DiabetesR01DK066483 · NIDDK · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI MANDARINO, LAWRENCE J · 2004 to 2018
$6.7M
Epigenetics and the Origin of Muscle Insulin Resistance in HumansR01DK094013 · NIDDK · UNIVERSITY OF ARIZONA · PI COLETTA, DAWN KATRINA · 2012 to 2016
$1.9M
NIDDK NIH HHS R01 DK047936NIDDK NIH HHS R01 DK066483NIDDK NIH HHS R01 DK094013
6 · The paper itself

Abstract

BACKGROUND/

aimsThe increased occurrence of type 2 diabetes and its clinical correlates is a global public health issue, and there are continued efforts to find its genetic determinant across ethnically diverse populations. The aims of this study were to determine the heritability of diabetes and metabolic syndrome phenotypes in the Arizona Insulin Resistance (AIR) registry and to perform an association analysis of common single nucleotide polymorphisms (SNPs) identified by GWAS with these traits. All study participants were Mexican Americans from the AIR registry.

methodsMetabolic, anthropometric, demographic and medical history information was obtained on the 667 individuals enrolled in the registry.

resultsThe heritability estimates were moderate to high in magnitude and significant, indicating that the AIR registry is well suited for the identification of genetic factors contributing to diabetes and the metabolic syndrome. From the 30 GWAS genes selected (some genes were represented by multiple SNPs), 20 SNPs exhibited associations with one or more of the diabetes related traits with nominal significance (p ≤ 0.05). In addition, 25 SNPs were nominally significantly associated with one or more of the metabolic phenotypes tested (p ≤ 0.05). Most notably, 5 SNPs from 5 genes [body mass index (BMI), hip circumference: rs3751812/FTO; fasting plasma glucose, hemoglobin A1c: rs4607517/GCK; very-low-density lipoprotein: rs10830963/MTNR1B; BMI: rs13266634/SLC30A8, and total cholesterol, low-density lipoprotein: rs7578597/THADA] were significantly associated with obesity, glycemic, and lipid phenotypes when using the multiple testing significance threshold of 0.0015.

conclusionThese findings extend previous work on Mexican Americans to suggest that metabolic disease is strongly influenced by genetic background in this high-risk population.

Indexed as

Polymorphism, Single NucleotideAdolescentAdultArizonaBlood GlucoseBlood PressureBody Mass IndexDiabetes Mellitus, Type 2Family HealthFemaleGene FrequencyGenetic Association StudiesGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHumansBlood GlucoseLipids

Identifiers

PMID25060389
PMCPMC4910511
OpenAlexW2027560996

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.