Evidence map›Paper›PMID 25057928›Full record

ArticlePloS one2014

Drosophila eyes absent is required for normal cone and pigment cell development.

Umesh C Karandikar, Meng Jin, Barbara Jusiak, SuJin Kwak, Rui Chen, Graeme Mardon

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Cell Cycle Regulation by NF-YC inInternational journal of molecular sciences · 2023
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. The fly eye: Through the looking glass.Developmental dynamics : an official publication of the American Association of Anatomists · 2018
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Umesh C KarandikarDepartment of Pathology and Immunology, Baylor College of Medicine, Houston, Texas, United States of America.
Meng JinDepartment of Pathology and Immunology, Baylor College of Medicine, Houston, Texas, United States of America.
Barbara JusiakProgram in Developmental Biology, Baylor College of Medicine, Houston, Texas, United States of America.
SuJin KwakDepartment of Pathology and Immunology, Baylor College of Medicine, Houston, Texas, United States of America.
Rui ChenDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America; Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, United States of America.
Graeme MardonDepartment of Pathology and Immunology, Baylor College of Medicine, Houston, Texas, United States of America; Program in Developmental Biology, Baylor College of Medicine, Houston, Texas, United States of America; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America; Department of Neuroscience, Baylor College of Medicine, Houston, Texas, United States of America; Department of Ophthalmology, Baylor College of Medicine, Houston, Texas, United States of America; Program in Cell and Molecular Biology, Baylor College of Medicine, Houston, Texas, United States of America.

Funding

VISION RESEARCH CENTERP30EY002520 · NEI · BAYLOR COLLEGE OF MEDICINE · PI Samuel M Wu · 1985 to 2026
$14.8M
Steps towards a paternal gene activation therapy for Angelman syndromeU54HD083092 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI NELSON, DAVID LOREN, NEUL, JEFFREY L · 2014 to 2019
$7.8M
Retinal Cell-Fate Determination and Pattern FormationR01EY011232 · NEI · BAYLOR COLLEGE OF MEDICINE · PI MARDON, GRAEME · 1996 to 2019
$6.1M
NEI NIH HHS EY-002520NEI NIH HHS P30 EY002520NEI NIH HHS R01 EY011232NICHD NIH HHS U54 HD083092
6 · The paper itself

Abstract

In Drosophila, development of the compound eye is orchestrated by a network of highly conserved transcriptional regulators known as the retinal determination (RD) network. The retinal determination gene eyes absent (eya) is expressed in most cells within the developing eye field, from undifferentiated retinal progenitors to photoreceptor cells whose differentiation begins at the morphogenetic furrow (MF). Loss of eya expression leads to an early block in retinal development, making it impossible to study the role of eya expression during later steps of retinal differentiation. We have identified two new regulatory regions that control eya expression during retinal development. These two enhancers are necessary to maintain eya expression anterior to the MF (eya-IAM) and in photoreceptors (eya-PSE), respectively. We find that deleting these enhancers affects developmental events anterior to the MF as well as retinal differentiation posterior to the MF. In line with previous results, we find that reducing eya expression anterior to the MF affects several early steps during early retinal differentiation, including cell cycle arrest and expression of the proneural gene ato. Consistent with previous observations that suggest a role for eya in cell proliferation during early development we find that deletion of eya-IAM leads to a marked reduction in the size of the adult retinal field. On the other hand, deletion of eya-PSE leads to defects in cone and pigment cell development. In addition we find that eya expression is necessary to activate expression of the cone cell marker Cut and to regulate levels of the Hedgehog pathway effector Ci. In summary, our study uncovers novel aspects of eya-mediated regulation of eye development. The genetic tools generated in this study will allow for a detailed study of how the RD network regulates key steps in eye formation.

Indexed as

Enhancer Elements, GeneticGene Expression Regulation, DevelopmentalAnimalsBasic Helix-Loop-Helix ProteinsCell Cycle CheckpointsCell DifferentiationDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsEye ProteinsHomeodomain ProteinsLarvaNerve Tissue ProteinsNuclear ProteinsOrganogenesisRetinal Cone Photoreceptor Cellsato protein, DrosophilaBasic Helix-Loop-Helix Proteinsci protein, Drosophilact protein, DrosophilaDNA-Binding ProteinsDrosophila Proteinseya protein, DrosophilaEye ProteinsHomeodomain ProteinsNerve Tissue ProteinsNuclear ProteinsTranscription Factors

Identifiers

PMID25057928
PMCPMC4109927

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.